Protein–RNA interactions for Protein: Q6WKZ4

RAB11FIP1, Rab11 family-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1Q6WKZ4 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB11FIP1Q6WKZ4 MCRIP2P1-201ENST00000394346 511 ntBASIC20.75■□□□□ 0.91
RAB11FIP1Q6WKZ4 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.75■□□□□ 0.91
RAB11FIP1Q6WKZ4 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RAB11FIP1Q6WKZ4 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
RAB11FIP1Q6WKZ4 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.75■□□□□ 0.91
RAB11FIP1Q6WKZ4 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB11FIP1Q6WKZ4 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.75■□□□□ 0.91
RAB11FIP1Q6WKZ4 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB11FIP1Q6WKZ4 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RAB11FIP1Q6WKZ4 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RAB11FIP1Q6WKZ4 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
RAB11FIP1Q6WKZ4 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RAB11FIP1Q6WKZ4 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RAB11FIP1Q6WKZ4 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB11FIP1Q6WKZ4 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
RAB11FIP1Q6WKZ4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB11FIP1Q6WKZ4 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RAB11FIP1Q6WKZ4 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB11FIP1Q6WKZ4 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB11FIP1Q6WKZ4 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
RAB11FIP1Q6WKZ4 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB11FIP1Q6WKZ4 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
RAB11FIP1Q6WKZ4 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RAB11FIP1Q6WKZ4 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB11FIP1Q6WKZ4 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB11FIP1Q6WKZ4 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB11FIP1Q6WKZ4 AL024507.2-201ENST00000606070 2574 ntBASIC20.73■□□□□ 0.91
RAB11FIP1Q6WKZ4 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB11FIP1Q6WKZ4 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB11FIP1Q6WKZ4 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB11FIP1Q6WKZ4 AC116050.2-201ENST00000612102 1779 ntBASIC20.73■□□□□ 0.91
RAB11FIP1Q6WKZ4 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.73■□□□□ 0.91
RAB11FIP1Q6WKZ4 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.73■□□□□ 0.91
RAB11FIP1Q6WKZ4 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.73■□□□□ 0.91
RAB11FIP1Q6WKZ4 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
RAB11FIP1Q6WKZ4 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB11FIP1Q6WKZ4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.73■□□□□ 0.91
RAB11FIP1Q6WKZ4 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB11FIP1Q6WKZ4 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB11FIP1Q6WKZ4 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.73■□□□□ 0.91
RAB11FIP1Q6WKZ4 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB11FIP1Q6WKZ4 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB11FIP1Q6WKZ4 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
RAB11FIP1Q6WKZ4 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAB11FIP1Q6WKZ4 KRT18P68-201ENST00000392293 1000 ntBASIC20.72■□□□□ 0.91
RAB11FIP1Q6WKZ4 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.72■□□□□ 0.91
RAB11FIP1Q6WKZ4 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.72■□□□□ 0.91
RAB11FIP1Q6WKZ4 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.72■□□□□ 0.91
RAB11FIP1Q6WKZ4 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.72■□□□□ 0.91
RAB11FIP1Q6WKZ4 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.72■□□□□ 0.91
RAB11FIP1Q6WKZ4 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.72■□□□□ 0.91
RAB11FIP1Q6WKZ4 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.72■□□□□ 0.91
RAB11FIP1Q6WKZ4 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.72■□□□□ 0.91
RAB11FIP1Q6WKZ4 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.72■□□□□ 0.91
RAB11FIP1Q6WKZ4 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB11FIP1Q6WKZ4 AL589743.5-201ENST00000616611 1050 ntBASIC20.72■□□□□ 0.91
RAB11FIP1Q6WKZ4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB11FIP1Q6WKZ4 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB11FIP1Q6WKZ4 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.72■□□□□ 0.91
RAB11FIP1Q6WKZ4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAB11FIP1Q6WKZ4 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAB11FIP1Q6WKZ4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB11FIP1Q6WKZ4 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.72■□□□□ 0.91
RAB11FIP1Q6WKZ4 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAB11FIP1Q6WKZ4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAB11FIP1Q6WKZ4 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB11FIP1Q6WKZ4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RAB11FIP1Q6WKZ4 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAB11FIP1Q6WKZ4 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.71■□□□□ 0.91
RAB11FIP1Q6WKZ4 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB11FIP1Q6WKZ4 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB11FIP1Q6WKZ4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.71■□□□□ 0.91
RAB11FIP1Q6WKZ4 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB11FIP1Q6WKZ4 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.71■□□□□ 0.91
RAB11FIP1Q6WKZ4 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.71■□□□□ 0.91
RAB11FIP1Q6WKZ4 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.71■□□□□ 0.91
RAB11FIP1Q6WKZ4 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RAB11FIP1Q6WKZ4 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.71■□□□□ 0.91
RAB11FIP1Q6WKZ4 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.71■□□□□ 0.91
RAB11FIP1Q6WKZ4 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.71■□□□□ 0.91
RAB11FIP1Q6WKZ4 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB11FIP1Q6WKZ4 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAB11FIP1Q6WKZ4 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB11FIP1Q6WKZ4 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAB11FIP1Q6WKZ4 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB11FIP1Q6WKZ4 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.71■□□□□ 0.91
RAB11FIP1Q6WKZ4 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB11FIP1Q6WKZ4 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB11FIP1Q6WKZ4 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.7■□□□□ 0.9
RAB11FIP1Q6WKZ4 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.7■□□□□ 0.9
RAB11FIP1Q6WKZ4 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RAB11FIP1Q6WKZ4 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB11FIP1Q6WKZ4 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB11FIP1Q6WKZ4 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB11FIP1Q6WKZ4 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB11FIP1Q6WKZ4 KRT18P29-201ENST00000397031 1267 ntBASIC20.7■□□□□ 0.9
RAB11FIP1Q6WKZ4 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RAB11FIP1Q6WKZ4 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
RAB11FIP1Q6WKZ4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms