Protein–RNA interactions for Protein: Q6TDU7

CASC1, Protein CASC1, humanhuman

Predictions only

Length 716 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1Q6TDU7 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC25.16■■□□□ 1.62
CASC1Q6TDU7 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
CASC1Q6TDU7 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC25.16■■□□□ 1.62
CASC1Q6TDU7 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC25.16■■□□□ 1.62
CASC1Q6TDU7 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CASC1Q6TDU7 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CASC1Q6TDU7 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CASC1Q6TDU7 KRT16P2-201ENST00000414673 1423 ntBASIC25.15■■□□□ 1.62
CASC1Q6TDU7 AC073314.1-201ENST00000568729 2216 ntBASIC25.15■■□□□ 1.62
CASC1Q6TDU7 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CASC1Q6TDU7 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC25.15■■□□□ 1.62
CASC1Q6TDU7 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CASC1Q6TDU7 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC25.15■■□□□ 1.62
CASC1Q6TDU7 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
CASC1Q6TDU7 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC25.15■■□□□ 1.62
CASC1Q6TDU7 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC25.14■■□□□ 1.62
CASC1Q6TDU7 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC25.14■■□□□ 1.62
CASC1Q6TDU7 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
CASC1Q6TDU7 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.62
CASC1Q6TDU7 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC25.14■■□□□ 1.62
CASC1Q6TDU7 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC25.14■■□□□ 1.62
CASC1Q6TDU7 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC25.14■■□□□ 1.62
CASC1Q6TDU7 AC245052.3-201ENST00000450182 901 ntBASIC25.14■■□□□ 1.62
CASC1Q6TDU7 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC25.14■■□□□ 1.62
CASC1Q6TDU7 SP2-202ENST00000613139 908 ntTSL 5 BASIC25.14■■□□□ 1.62
CASC1Q6TDU7 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC25.14■■□□□ 1.61
CASC1Q6TDU7 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.61
CASC1Q6TDU7 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.61
CASC1Q6TDU7 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC25.14■■□□□ 1.61
CASC1Q6TDU7 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
CASC1Q6TDU7 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
CASC1Q6TDU7 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.61
CASC1Q6TDU7 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
CASC1Q6TDU7 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC25.14■■□□□ 1.61
CASC1Q6TDU7 SLC25A24-204ENST00000569674 2357 ntBASIC25.13■■□□□ 1.61
CASC1Q6TDU7 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CASC1Q6TDU7 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CASC1Q6TDU7 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CASC1Q6TDU7 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
CASC1Q6TDU7 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
CASC1Q6TDU7 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC25.13■■□□□ 1.61
CASC1Q6TDU7 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC25.13■■□□□ 1.61
CASC1Q6TDU7 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC25.13■■□□□ 1.61
CASC1Q6TDU7 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC25.13■■□□□ 1.61
CASC1Q6TDU7 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
CASC1Q6TDU7 FP700111.2-201ENST00000619190 1892 ntBASIC25.13■■□□□ 1.61
CASC1Q6TDU7 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CASC1Q6TDU7 AC092667.1-201ENST00000434301 2586 ntBASIC25.12■■□□□ 1.61
CASC1Q6TDU7 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CASC1Q6TDU7 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CASC1Q6TDU7 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
CASC1Q6TDU7 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC25.12■■□□□ 1.61
CASC1Q6TDU7 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC25.12■■□□□ 1.61
CASC1Q6TDU7 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CASC1Q6TDU7 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CASC1Q6TDU7 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CASC1Q6TDU7 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC25.12■■□□□ 1.61
CASC1Q6TDU7 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC25.12■■□□□ 1.61
CASC1Q6TDU7 YBX1P1-201ENST00000445822 960 ntBASIC25.12■■□□□ 1.61
CASC1Q6TDU7 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CASC1Q6TDU7 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC25.12■■□□□ 1.61
CASC1Q6TDU7 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CASC1Q6TDU7 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC25.12■■□□□ 1.61
CASC1Q6TDU7 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC25.12■■□□□ 1.61
CASC1Q6TDU7 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CASC1Q6TDU7 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CASC1Q6TDU7 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC25.12■■□□□ 1.61
CASC1Q6TDU7 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CASC1Q6TDU7 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CASC1Q6TDU7 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
CASC1Q6TDU7 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
CASC1Q6TDU7 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC25.11■■□□□ 1.61
CASC1Q6TDU7 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CASC1Q6TDU7 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC25.11■■□□□ 1.61
CASC1Q6TDU7 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CASC1Q6TDU7 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CASC1Q6TDU7 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CASC1Q6TDU7 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
CASC1Q6TDU7 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC25.11■■□□□ 1.61
CASC1Q6TDU7 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CASC1Q6TDU7 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC25.11■■□□□ 1.61
CASC1Q6TDU7 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC25.11■■□□□ 1.61
CASC1Q6TDU7 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC25.11■■□□□ 1.61
CASC1Q6TDU7 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC25.11■■□□□ 1.61
CASC1Q6TDU7 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC25.11■■□□□ 1.61
CASC1Q6TDU7 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CASC1Q6TDU7 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CASC1Q6TDU7 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CASC1Q6TDU7 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CASC1Q6TDU7 AC123595.1-201ENST00000440769 1046 ntBASIC25.1■■□□□ 1.61
CASC1Q6TDU7 AC010141.2-201ENST00000452426 721 ntBASIC25.1■■□□□ 1.61
CASC1Q6TDU7 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC25.1■■□□□ 1.61
CASC1Q6TDU7 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC25.1■■□□□ 1.61
CASC1Q6TDU7 BID-203ENST00000399765 1879 ntTSL 2 BASIC25.1■■□□□ 1.61
CASC1Q6TDU7 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC25.1■■□□□ 1.61
CASC1Q6TDU7 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
CASC1Q6TDU7 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
CASC1Q6TDU7 AC027702.1-201ENST00000563810 1770 ntBASIC25.09■■□□□ 1.61
CASC1Q6TDU7 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CASC1Q6TDU7 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms