Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF43Q68DV7 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF43Q68DV7 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF43Q68DV7 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF43Q68DV7 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF43Q68DV7 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF43Q68DV7 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF43Q68DV7 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.59■■□□□ 1.05
RNF43Q68DV7 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RNF43Q68DV7 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
RNF43Q68DV7 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.58■■□□□ 1.05
RNF43Q68DV7 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RNF43Q68DV7 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
RNF43Q68DV7 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
RNF43Q68DV7 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RNF43Q68DV7 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.58■■□□□ 1.05
RNF43Q68DV7 AL138781.1-201ENST00000566567 1274 ntBASIC21.58■■□□□ 1.05
RNF43Q68DV7 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.58■■□□□ 1.05
RNF43Q68DV7 AC005181.1-201ENST00000604782 1256 ntBASIC21.58■■□□□ 1.05
RNF43Q68DV7 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
RNF43Q68DV7 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
RNF43Q68DV7 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
RNF43Q68DV7 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RNF43Q68DV7 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.58■■□□□ 1.04
RNF43Q68DV7 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.58■■□□□ 1.04
RNF43Q68DV7 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RNF43Q68DV7 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.57■■□□□ 1.04
RNF43Q68DV7 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
RNF43Q68DV7 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF43Q68DV7 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
RNF43Q68DV7 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF43Q68DV7 RBM17P2-201ENST00000616397 1405 ntBASIC21.57■■□□□ 1.04
RNF43Q68DV7 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF43Q68DV7 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF43Q68DV7 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RNF43Q68DV7 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF43Q68DV7 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
RNF43Q68DV7 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.57■■□□□ 1.04
RNF43Q68DV7 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.57■■□□□ 1.04
RNF43Q68DV7 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.57■■□□□ 1.04
RNF43Q68DV7 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.57■■□□□ 1.04
RNF43Q68DV7 AC120498.10-201ENST00000621827 505 ntBASIC21.57■■□□□ 1.04
RNF43Q68DV7 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.57■■□□□ 1.04
RNF43Q68DV7 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RNF43Q68DV7 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.56■■□□□ 1.04
RNF43Q68DV7 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF43Q68DV7 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF43Q68DV7 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RNF43Q68DV7 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
RNF43Q68DV7 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RNF43Q68DV7 GUSBP6-202ENST00000438529 1198 ntBASIC21.56■■□□□ 1.04
RNF43Q68DV7 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.56■■□□□ 1.04
RNF43Q68DV7 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.56■■□□□ 1.04
RNF43Q68DV7 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.56■■□□□ 1.04
RNF43Q68DV7 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.56■■□□□ 1.04
RNF43Q68DV7 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF43Q68DV7 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
RNF43Q68DV7 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF43Q68DV7 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.56■■□□□ 1.04
RNF43Q68DV7 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF43Q68DV7 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF43Q68DV7 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF43Q68DV7 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF43Q68DV7 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.56■■□□□ 1.04
RNF43Q68DV7 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
RNF43Q68DV7 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RNF43Q68DV7 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF43Q68DV7 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RNF43Q68DV7 AC068338.2-201ENST00000563278 1430 ntBASIC21.55■■□□□ 1.04
RNF43Q68DV7 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
RNF43Q68DV7 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF43Q68DV7 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
RNF43Q68DV7 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
RNF43Q68DV7 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.55■■□□□ 1.04
RNF43Q68DV7 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.55■■□□□ 1.04
RNF43Q68DV7 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC21.55■■□□□ 1.04
RNF43Q68DV7 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.55■■□□□ 1.04
RNF43Q68DV7 AC133552.2-202ENST00000575694 574 ntBASIC21.55■■□□□ 1.04
RNF43Q68DV7 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.55■■□□□ 1.04
RNF43Q68DV7 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.55■■□□□ 1.04
RNF43Q68DV7 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
RNF43Q68DV7 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.55■■□□□ 1.04
RNF43Q68DV7 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF43Q68DV7 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.55■■□□□ 1.04
RNF43Q68DV7 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.55■■□□□ 1.04
RNF43Q68DV7 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF43Q68DV7 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
RNF43Q68DV7 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.55■■□□□ 1.04
RNF43Q68DV7 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF43Q68DV7 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
RNF43Q68DV7 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.54■■□□□ 1.04
RNF43Q68DV7 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF43Q68DV7 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
RNF43Q68DV7 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RNF43Q68DV7 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF43Q68DV7 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
RNF43Q68DV7 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21.54■■□□□ 1.04
RNF43Q68DV7 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF43Q68DV7 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.54■■□□□ 1.04
RNF43Q68DV7 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms