Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC16.31■□□□□ 0.2
FAM78BQ5VT40 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC16.31■□□□□ 0.2
FAM78BQ5VT40 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FAM78BQ5VT40 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC16.31■□□□□ 0.2
FAM78BQ5VT40 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FAM78BQ5VT40 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FAM78BQ5VT40 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
FAM78BQ5VT40 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
FAM78BQ5VT40 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FAM78BQ5VT40 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
FAM78BQ5VT40 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FAM78BQ5VT40 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
FAM78BQ5VT40 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FAM78BQ5VT40 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FAM78BQ5VT40 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FAM78BQ5VT40 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC16.3■□□□□ 0.2
FAM78BQ5VT40 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
FAM78BQ5VT40 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
FAM78BQ5VT40 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
FAM78BQ5VT40 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
FAM78BQ5VT40 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FAM78BQ5VT40 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC16.3■□□□□ 0.2
FAM78BQ5VT40 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
FAM78BQ5VT40 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
FAM78BQ5VT40 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC16.3■□□□□ 0.2
FAM78BQ5VT40 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FAM78BQ5VT40 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
FAM78BQ5VT40 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
FAM78BQ5VT40 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC16.3■□□□□ 0.2
FAM78BQ5VT40 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC16.3■□□□□ 0.2
FAM78BQ5VT40 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC16.3■□□□□ 0.2
FAM78BQ5VT40 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC16.3■□□□□ 0.2
FAM78BQ5VT40 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
FAM78BQ5VT40 ME2-218ENST00000640965 2476 ntTSL 5 BASIC16.3■□□□□ 0.2
FAM78BQ5VT40 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FAM78BQ5VT40 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.3■□□□□ 0.2
FAM78BQ5VT40 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
FAM78BQ5VT40 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FAM78BQ5VT40 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
FAM78BQ5VT40 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC16.3■□□□□ 0.2
FAM78BQ5VT40 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FAM78BQ5VT40 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
FAM78BQ5VT40 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
FAM78BQ5VT40 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FAM78BQ5VT40 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FAM78BQ5VT40 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FAM78BQ5VT40 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
FAM78BQ5VT40 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.29■□□□□ 0.2
FAM78BQ5VT40 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
FAM78BQ5VT40 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC16.29■□□□□ 0.2
FAM78BQ5VT40 AC121338.2-201ENST00000622535 1744 ntBASIC16.29■□□□□ 0.2
FAM78BQ5VT40 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FAM78BQ5VT40 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC16.29■□□□□ 0.2
FAM78BQ5VT40 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FAM78BQ5VT40 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FAM78BQ5VT40 AC010525.1-201ENST00000585559 441 ntBASIC16.29■□□□□ 0.2
FAM78BQ5VT40 MIR4466-201ENST00000606121 54 ntBASIC16.29■□□□□ 0.2
FAM78BQ5VT40 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FAM78BQ5VT40 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC16.29■□□□□ 0.2
FAM78BQ5VT40 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FAM78BQ5VT40 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FAM78BQ5VT40 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
FAM78BQ5VT40 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
FAM78BQ5VT40 AP006587.3-201ENST00000525742 1516 ntBASIC16.29■□□□□ 0.2
FAM78BQ5VT40 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FAM78BQ5VT40 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
FAM78BQ5VT40 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
FAM78BQ5VT40 NARF-205ENST00000412079 1760 ntTSL 5 BASIC16.28■□□□□ 0.2
FAM78BQ5VT40 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
FAM78BQ5VT40 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
FAM78BQ5VT40 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FAM78BQ5VT40 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
FAM78BQ5VT40 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
FAM78BQ5VT40 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
FAM78BQ5VT40 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
FAM78BQ5VT40 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FAM78BQ5VT40 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FAM78BQ5VT40 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
FAM78BQ5VT40 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
FAM78BQ5VT40 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FAM78BQ5VT40 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC16.28■□□□□ 0.2
FAM78BQ5VT40 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
FAM78BQ5VT40 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FAM78BQ5VT40 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
FAM78BQ5VT40 AC131281.2-201ENST00000520478 145 ntBASIC16.28■□□□□ 0.2
FAM78BQ5VT40 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
FAM78BQ5VT40 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC16.28■□□□□ 0.2
FAM78BQ5VT40 AC131212.1-201ENST00000613771 668 ntBASIC16.28■□□□□ 0.2
FAM78BQ5VT40 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FAM78BQ5VT40 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FAM78BQ5VT40 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FAM78BQ5VT40 AC027702.1-201ENST00000563810 1770 ntBASIC16.28■□□□□ 0.2
FAM78BQ5VT40 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
FAM78BQ5VT40 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FAM78BQ5VT40 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
FAM78BQ5VT40 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
FAM78BQ5VT40 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC16.27■□□□□ 0.2
FAM78BQ5VT40 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
FAM78BQ5VT40 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
FAM78BQ5VT40 STX5-203ENST00000394690 1568 ntTSL 5 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms