Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
UBR4Q5T4S7 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
UBR4Q5T4S7 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBR4Q5T4S7 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
UBR4Q5T4S7 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC11.45□□□□□ -0.58
UBR4Q5T4S7 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBR4Q5T4S7 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC11.45□□□□□ -0.58
UBR4Q5T4S7 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC11.45□□□□□ -0.58
UBR4Q5T4S7 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBR4Q5T4S7 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBR4Q5T4S7 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC11.45□□□□□ -0.58
UBR4Q5T4S7 PBX1-209ENST00000485769 834 ntTSL 2 BASIC11.45□□□□□ -0.58
UBR4Q5T4S7 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
UBR4Q5T4S7 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBR4Q5T4S7 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBR4Q5T4S7 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
UBR4Q5T4S7 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBR4Q5T4S7 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBR4Q5T4S7 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBR4Q5T4S7 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
UBR4Q5T4S7 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBR4Q5T4S7 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBR4Q5T4S7 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
UBR4Q5T4S7 HTR5BP-201ENST00000430851 1154 ntBASIC11.45□□□□□ -0.58
UBR4Q5T4S7 EMBP1-201ENST00000458200 901 ntBASIC11.45□□□□□ -0.58
UBR4Q5T4S7 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC11.45□□□□□ -0.58
UBR4Q5T4S7 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
UBR4Q5T4S7 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC11.45□□□□□ -0.58
UBR4Q5T4S7 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
UBR4Q5T4S7 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC11.45□□□□□ -0.58
UBR4Q5T4S7 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC11.45□□□□□ -0.58
UBR4Q5T4S7 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC11.44□□□□□ -0.58
UBR4Q5T4S7 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBR4Q5T4S7 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC11.44□□□□□ -0.58
UBR4Q5T4S7 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
UBR4Q5T4S7 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBR4Q5T4S7 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBR4Q5T4S7 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
UBR4Q5T4S7 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBR4Q5T4S7 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBR4Q5T4S7 AC116407.4-201ENST00000623319 1061 ntBASIC11.44□□□□□ -0.58
UBR4Q5T4S7 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
UBR4Q5T4S7 TSPY5P-201ENST00000426936 936 ntBASIC11.44□□□□□ -0.58
UBR4Q5T4S7 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBR4Q5T4S7 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC11.44□□□□□ -0.58
UBR4Q5T4S7 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBR4Q5T4S7 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBR4Q5T4S7 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBR4Q5T4S7 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC11.44□□□□□ -0.58
UBR4Q5T4S7 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBR4Q5T4S7 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
UBR4Q5T4S7 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
UBR4Q5T4S7 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBR4Q5T4S7 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBR4Q5T4S7 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBR4Q5T4S7 CALY-203ENST00000368558 825 ntTSL 5 BASIC11.44□□□□□ -0.58
UBR4Q5T4S7 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBR4Q5T4S7 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC11.44□□□□□ -0.58
UBR4Q5T4S7 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC11.44□□□□□ -0.58
UBR4Q5T4S7 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC11.44□□□□□ -0.58
UBR4Q5T4S7 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC11.44□□□□□ -0.58
UBR4Q5T4S7 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBR4Q5T4S7 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
UBR4Q5T4S7 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBR4Q5T4S7 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
UBR4Q5T4S7 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
UBR4Q5T4S7 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC11.43□□□□□ -0.58
UBR4Q5T4S7 CEBPA-AS1-201ENST00000592982 2198 ntBASIC11.43□□□□□ -0.58
UBR4Q5T4S7 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
UBR4Q5T4S7 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UBR4Q5T4S7 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
UBR4Q5T4S7 NXN-202ENST00000537628 1340 ntTSL 3 BASIC11.43□□□□□ -0.58
UBR4Q5T4S7 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC11.43□□□□□ -0.58
UBR4Q5T4S7 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC11.43□□□□□ -0.58
UBR4Q5T4S7 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC11.43□□□□□ -0.58
UBR4Q5T4S7 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
UBR4Q5T4S7 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UBR4Q5T4S7 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC11.43□□□□□ -0.58
UBR4Q5T4S7 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UBR4Q5T4S7 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
UBR4Q5T4S7 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UBR4Q5T4S7 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC11.43□□□□□ -0.58
UBR4Q5T4S7 FXN-203ENST00000396366 922 ntTSL 2 BASIC11.43□□□□□ -0.58
UBR4Q5T4S7 RNF152P1-201ENST00000397754 604 ntBASIC11.43□□□□□ -0.58
UBR4Q5T4S7 PRR29-207ENST00000580752 458 ntTSL 3 BASIC11.43□□□□□ -0.58
UBR4Q5T4S7 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UBR4Q5T4S7 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC11.43□□□□□ -0.58
UBR4Q5T4S7 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
UBR4Q5T4S7 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UBR4Q5T4S7 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UBR4Q5T4S7 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UBR4Q5T4S7 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC11.43□□□□□ -0.58
UBR4Q5T4S7 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
UBR4Q5T4S7 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UBR4Q5T4S7 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC11.43□□□□□ -0.58
UBR4Q5T4S7 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC11.42□□□□□ -0.58
UBR4Q5T4S7 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC11.42□□□□□ -0.58
UBR4Q5T4S7 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC11.42□□□□□ -0.58
UBR4Q5T4S7 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC11.42□□□□□ -0.58
UBR4Q5T4S7 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC11.42□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms