Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
VARS2Q5ST30 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VARS2Q5ST30 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.92■■□□□ 1.1
VARS2Q5ST30 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VARS2Q5ST30 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
VARS2Q5ST30 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.91■■□□□ 1.1
VARS2Q5ST30 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.91■■□□□ 1.1
VARS2Q5ST30 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
VARS2Q5ST30 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
VARS2Q5ST30 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.91■■□□□ 1.1
VARS2Q5ST30 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.91■■□□□ 1.1
VARS2Q5ST30 AC060766.5-201ENST00000590539 871 ntBASIC21.91■■□□□ 1.1
VARS2Q5ST30 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
VARS2Q5ST30 AC105020.6-201ENST00000621523 1217 ntBASIC21.91■■□□□ 1.1
VARS2Q5ST30 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
VARS2Q5ST30 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
VARS2Q5ST30 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
VARS2Q5ST30 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
VARS2Q5ST30 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
VARS2Q5ST30 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
VARS2Q5ST30 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
VARS2Q5ST30 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.9■■□□□ 1.1
VARS2Q5ST30 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
VARS2Q5ST30 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.9■■□□□ 1.1
VARS2Q5ST30 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
VARS2Q5ST30 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.9■■□□□ 1.1
VARS2Q5ST30 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
VARS2Q5ST30 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
VARS2Q5ST30 AC026366.1-201ENST00000488803 879 ntBASIC21.9■■□□□ 1.1
VARS2Q5ST30 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
VARS2Q5ST30 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
VARS2Q5ST30 HLA-B-256ENST00000639848 1089 ntBASIC21.9■■□□□ 1.1
VARS2Q5ST30 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.9■■□□□ 1.1
VARS2Q5ST30 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
VARS2Q5ST30 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
VARS2Q5ST30 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
VARS2Q5ST30 AC244015.2-201ENST00000616358 1861 ntBASIC21.9■■□□□ 1.1
VARS2Q5ST30 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
VARS2Q5ST30 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.89■■□□□ 1.1
VARS2Q5ST30 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
VARS2Q5ST30 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
VARS2Q5ST30 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.89■■□□□ 1.09
VARS2Q5ST30 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
VARS2Q5ST30 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.89■■□□□ 1.09
VARS2Q5ST30 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.89■■□□□ 1.09
VARS2Q5ST30 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
VARS2Q5ST30 AC006058.3-201ENST00000606217 1069 ntBASIC21.89■■□□□ 1.09
VARS2Q5ST30 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.89■■□□□ 1.09
VARS2Q5ST30 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.89■■□□□ 1.09
VARS2Q5ST30 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
VARS2Q5ST30 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
VARS2Q5ST30 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.88■■□□□ 1.09
VARS2Q5ST30 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
VARS2Q5ST30 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.88■■□□□ 1.09
VARS2Q5ST30 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
VARS2Q5ST30 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
VARS2Q5ST30 EP400NL-214ENST00000641289 2402 ntBASIC21.88■■□□□ 1.09
VARS2Q5ST30 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
VARS2Q5ST30 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.88■■□□□ 1.09
VARS2Q5ST30 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.88■■□□□ 1.09
VARS2Q5ST30 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
VARS2Q5ST30 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
VARS2Q5ST30 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
VARS2Q5ST30 AP003097.1-201ENST00000530657 1135 ntBASIC21.88■■□□□ 1.09
VARS2Q5ST30 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.88■■□□□ 1.09
VARS2Q5ST30 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
VARS2Q5ST30 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.88■■□□□ 1.09
VARS2Q5ST30 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
VARS2Q5ST30 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.88■■□□□ 1.09
VARS2Q5ST30 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
VARS2Q5ST30 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
VARS2Q5ST30 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
VARS2Q5ST30 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
VARS2Q5ST30 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
VARS2Q5ST30 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
VARS2Q5ST30 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
VARS2Q5ST30 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.87■■□□□ 1.09
VARS2Q5ST30 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
VARS2Q5ST30 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.87■■□□□ 1.09
VARS2Q5ST30 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
VARS2Q5ST30 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.87■■□□□ 1.09
VARS2Q5ST30 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
VARS2Q5ST30 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
VARS2Q5ST30 AC087633.2-202ENST00000565166 1439 ntBASIC21.87■■□□□ 1.09
VARS2Q5ST30 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
VARS2Q5ST30 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.87■■□□□ 1.09
VARS2Q5ST30 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
VARS2Q5ST30 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
VARS2Q5ST30 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.86■■□□□ 1.09
VARS2Q5ST30 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
VARS2Q5ST30 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
VARS2Q5ST30 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
VARS2Q5ST30 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.86■■□□□ 1.09
VARS2Q5ST30 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
VARS2Q5ST30 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.86■■□□□ 1.09
VARS2Q5ST30 AC128676.1-201ENST00000454392 318 ntBASIC21.86■■□□□ 1.09
VARS2Q5ST30 AC098590.1-201ENST00000468126 897 ntBASIC21.86■■□□□ 1.09
VARS2Q5ST30 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
VARS2Q5ST30 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
VARS2Q5ST30 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms