Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.61■□□□□ 0.41
EFNB3Q15768 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.61■□□□□ 0.41
EFNB3Q15768 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EFNB3Q15768 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
EFNB3Q15768 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.61■□□□□ 0.41
EFNB3Q15768 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
EFNB3Q15768 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EFNB3Q15768 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EFNB3Q15768 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
EFNB3Q15768 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
EFNB3Q15768 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EFNB3Q15768 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
EFNB3Q15768 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.6■□□□□ 0.41
EFNB3Q15768 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.6■□□□□ 0.41
EFNB3Q15768 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EFNB3Q15768 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
EFNB3Q15768 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EFNB3Q15768 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.6■□□□□ 0.41
EFNB3Q15768 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
EFNB3Q15768 KRT18P68-201ENST00000392293 1000 ntBASIC17.6■□□□□ 0.41
EFNB3Q15768 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
EFNB3Q15768 AL355472.2-201ENST00000422958 438 ntBASIC17.6■□□□□ 0.41
EFNB3Q15768 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.6■□□□□ 0.41
EFNB3Q15768 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.6■□□□□ 0.41
EFNB3Q15768 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.6■□□□□ 0.41
EFNB3Q15768 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EFNB3Q15768 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.6■□□□□ 0.41
EFNB3Q15768 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
EFNB3Q15768 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.6■□□□□ 0.41
EFNB3Q15768 PKD1P6-201ENST00000343738 4769 ntBASIC17.6■□□□□ 0.41
EFNB3Q15768 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EFNB3Q15768 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EFNB3Q15768 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
EFNB3Q15768 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EFNB3Q15768 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
EFNB3Q15768 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EFNB3Q15768 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
EFNB3Q15768 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EFNB3Q15768 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
EFNB3Q15768 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EFNB3Q15768 KRT17P1-201ENST00000399211 1546 ntBASIC17.59■□□□□ 0.41
EFNB3Q15768 CYP21A1P-202ENST00000354927 1481 ntBASIC17.59■□□□□ 0.41
EFNB3Q15768 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.59■□□□□ 0.41
EFNB3Q15768 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EFNB3Q15768 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
EFNB3Q15768 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
EFNB3Q15768 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.59■□□□□ 0.41
EFNB3Q15768 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
EFNB3Q15768 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EFNB3Q15768 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.59■□□□□ 0.41
EFNB3Q15768 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EFNB3Q15768 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.59■□□□□ 0.41
EFNB3Q15768 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
EFNB3Q15768 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
EFNB3Q15768 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
EFNB3Q15768 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
EFNB3Q15768 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.58■□□□□ 0.41
EFNB3Q15768 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.58■□□□□ 0.41
EFNB3Q15768 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
EFNB3Q15768 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
EFNB3Q15768 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
EFNB3Q15768 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.58■□□□□ 0.41
EFNB3Q15768 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.58■□□□□ 0.4
EFNB3Q15768 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.58■□□□□ 0.4
EFNB3Q15768 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.58■□□□□ 0.4
EFNB3Q15768 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
EFNB3Q15768 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
EFNB3Q15768 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.58■□□□□ 0.4
EFNB3Q15768 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
EFNB3Q15768 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.58■□□□□ 0.4
EFNB3Q15768 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.58■□□□□ 0.4
EFNB3Q15768 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
EFNB3Q15768 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.58■□□□□ 0.4
EFNB3Q15768 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
EFNB3Q15768 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
EFNB3Q15768 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
EFNB3Q15768 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
EFNB3Q15768 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.58■□□□□ 0.4
EFNB3Q15768 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.58■□□□□ 0.4
EFNB3Q15768 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
EFNB3Q15768 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.57■□□□□ 0.4
EFNB3Q15768 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EFNB3Q15768 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
EFNB3Q15768 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
EFNB3Q15768 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
EFNB3Q15768 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
EFNB3Q15768 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EFNB3Q15768 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
EFNB3Q15768 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
EFNB3Q15768 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EFNB3Q15768 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
EFNB3Q15768 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.57■□□□□ 0.4
EFNB3Q15768 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
EFNB3Q15768 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.57■□□□□ 0.4
EFNB3Q15768 TSPY20P-201ENST00000450910 630 ntBASIC17.57■□□□□ 0.4
EFNB3Q15768 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.57■□□□□ 0.4
EFNB3Q15768 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.57■□□□□ 0.4
EFNB3Q15768 RNA5SP413-201ENST00000516373 109 ntBASIC17.57■□□□□ 0.4
EFNB3Q15768 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.57■□□□□ 0.4
EFNB3Q15768 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms