Protein–RNA interactions for Protein: Q04673

SSL1, General transcription and DNA repair factor IIH subunit SSL1, yeastyeast

Predicted RBP Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL1Q04673 YJL169WYJL169W 369 nt3.57□□□□□ -1.84
SSL1Q04673 YAR068WYAR068W 486 nt3.57□□□□□ -1.84
SSL1Q04673 YPL080CYPL080C 327 nt3.57□□□□□ -1.84
SSL1Q04673 ETP1YHL010C 1758 nt3.56□□□□□ -1.84
SSL1Q04673 CHD1YER164W 4407 nt3.56□□□□□ -1.84
SSL1Q04673 HMRA2YCR096C 360 nt3.56□□□□□ -1.84
SSL1Q04673 MRH1YDR033W 963 nt3.56□□□□□ -1.84
SSL1Q04673 SMT3YDR510W 306 nt3.56□□□□□ -1.84
SSL1Q04673 YER091C-AYER091C-A 222 nt3.56□□□□□ -1.84
SSL1Q04673 RTT105YER104W 627 nt3.56□□□□□ -1.84
SSL1Q04673 MCM22YJR135C 720 nt3.56□□□□□ -1.84
SSL1Q04673 RPL15AYLR029C 615 nt3.56□□□□□ -1.84
SSL1Q04673 UBC7YMR022W 498 nt3.56□□□□□ -1.84
SSL1Q04673 HHT2YNL031C 411 nt3.56□□□□□ -1.84
SSL1Q04673 PFY1YOR122C 381 nt3.56□□□□□ -1.84
SSL1Q04673 YPL039WYPL039W 951 nt3.56□□□□□ -1.84
SSL1Q04673 SPT10YJL127C 1923 nt3.56□□□□□ -1.84
SSL1Q04673 DIE2YGR227W 1578 nt3.55□□□□□ -1.84
SSL1Q04673 YJR003CYJR003C 1560 nt3.55□□□□□ -1.84
SSL1Q04673 SWT1YOR166C 1377 nt3.55□□□□□ -1.84
SSL1Q04673 AAD3YCR107W 1092 nt3.55□□□□□ -1.84
SSL1Q04673 NHP2YDL208W 471 nt3.55□□□□□ -1.84
SSL1Q04673 YDR413CYDR413C 576 nt3.55□□□□□ -1.84
SSL1Q04673 YEL032C-AYEL032C-A 162 nt3.55□□□□□ -1.84
SSL1Q04673 JIP3YLR331C 378 nt3.55□□□□□ -1.84
SSL1Q04673 JJJ2YJL162C 1752 nt3.55□□□□□ -1.84
SSL1Q04673 URA2YJL130C 6645 nt3.54□□□□□ -1.84
SSL1Q04673 RPN2YIL075C 2838 nt3.54□□□□□ -1.84
SSL1Q04673 KIN82YCR091W 2163 nt3.54□□□□□ -1.84
SSL1Q04673 MED1YPR070W 1701 nt3.54□□□□□ -1.84
SSL1Q04673 FRQ1YDR373W 573 nt3.54□□□□□ -1.84
SSL1Q04673 ATP17YDR377W 306 nt3.54□□□□□ -1.84
SSL1Q04673 ERG28YER044C 447 nt3.54□□□□□ -1.84
SSL1Q04673 RRT13YER066W 558 nt3.54□□□□□ -1.84
SSL1Q04673 YER097WYER097W 330 nt3.54□□□□□ -1.84
SSL1Q04673 YGL074CYGL074C 327 nt3.54□□□□□ -1.84
SSL1Q04673 HHF1YBR009C 312 nt3.54□□□□□ -1.84
SSL1Q04673 snR13snR13 124 nt3.54□□□□□ -1.84
SSL1Q04673 YOR385WYOR385W 873 nt3.54□□□□□ -1.84
SSL1Q04673 NSL1YPL233W 651 nt3.54□□□□□ -1.84
SSL1Q04673 YJR030CYJR030C 2238 nt3.54□□□□□ -1.84
SSL1Q04673 ALY1YKR021W 2748 nt3.53□□□□□ -1.84
SSL1Q04673 snR8snR8 190 nt3.53□□□□□ -1.84
SSL1Q04673 RPL29YFR032C-A 180 nt3.53□□□□□ -1.84
SSL1Q04673 RNR4YGR180C 1038 nt3.53□□□□□ -1.84
SSL1Q04673 YLR416CYLR416C 399 nt3.53□□□□□ -1.84
SSL1Q04673 RPL19BYBL027W 570 nt3.53□□□□□ -1.84
SSL1Q04673 YOR146WYOR146W 306 nt3.53□□□□□ -1.84
SSL1Q04673 YOR192C-CYOR192C-C 237 nt3.53□□□□□ -1.84
SSL1Q04673 DGK1YOR311C 873 nt3.53□□□□□ -1.84
SSL1Q04673 JEN1YKL217W 1851 nt3.53□□□□□ -1.84
SSL1Q04673 SEA4YBL104C 3117 nt3.53□□□□□ -1.84
SSL1Q04673 UBP5YER144C 2418 nt3.53□□□□□ -1.84
SSL1Q04673 MSD1YPL104W 1977 nt3.52□□□□□ -1.85
SSL1Q04673 MKT1YNL085W 2493 nt3.52□□□□□ -1.85
SSL1Q04673 ATP22YDR350C 2055 nt3.52□□□□□ -1.85
SSL1Q04673 XRS2YDR369C 2565 nt3.52□□□□□ -1.85
SSL1Q04673 YGR025WYGR025W 303 nt3.52□□□□□ -1.85
SSL1Q04673 YIL054WYIL054W 318 nt3.52□□□□□ -1.85
SSL1Q04673 BAR1YIL015W 1764 nt3.52□□□□□ -1.85
SSL1Q04673 RRN6YBL014C 2685 nt3.52□□□□□ -1.85
SSL1Q04673 GCD10YNL062C 1437 nt3.52□□□□□ -1.85
SSL1Q04673 SKP2YNL311C 2292 nt3.51□□□□□ -1.85
SSL1Q04673 SLP1YOR154W 1764 nt3.51□□□□□ -1.85
SSL1Q04673 TMA108YIL137C 2841 nt3.51□□□□□ -1.85
SSL1Q04673 ELM1YKL048C 1923 nt3.51□□□□□ -1.85
SSL1Q04673 AIM11YER093C-A 414 nt3.51□□□□□ -1.85
SSL1Q04673 TVP18YMR071C 504 nt3.51□□□□□ -1.85
SSL1Q04673 ATP3YBR039W 936 nt3.51□□□□□ -1.85
SSL1Q04673 SLM6YBR266C 453 nt3.51□□□□□ -1.85
SSL1Q04673 21S_rRNA21S_rRNA 3296 nt3.51□□□□□ -1.85
SSL1Q04673 SQS1YNL224C 2304 nt3.5□□□□□ -1.85
SSL1Q04673 TOP1YOL006C 2310 nt3.5□□□□□ -1.85
SSL1Q04673 APE2YKL157W 2859 nt3.5□□□□□ -1.85
SSL1Q04673 MUS81YDR386W 1899 nt3.5□□□□□ -1.85
SSL1Q04673 YGR027W-BYGR027W-B 5268 nt3.5□□□□□ -1.85
SSL1Q04673 YLR227W-BYLR227W-B 5268 nt3.5□□□□□ -1.85
SSL1Q04673 YPR158C-DYPR158C-D 5268 nt3.5□□□□□ -1.85
SSL1Q04673 CPA2YJR109C 3357 nt3.49□□□□□ -1.85
SSL1Q04673 SPT6YGR116W 4356 nt3.49□□□□□ -1.85
SSL1Q04673 YDL176WYDL176W 2127 nt3.49□□□□□ -1.85
SSL1Q04673 HOP2YGL033W 657 nt3.49□□□□□ -1.85
SSL1Q04673 YIL012WYIL012W 342 nt3.49□□□□□ -1.85
SSL1Q04673 LSM1YJL124C 519 nt3.49□□□□□ -1.85
SSL1Q04673 TMA19YKL056C 504 nt3.49□□□□□ -1.85
SSL1Q04673 MRP8YKL142W 660 nt3.49□□□□□ -1.85
SSL1Q04673 LSM2YBL026W 288 nt3.49□□□□□ -1.85
SSL1Q04673 RPB11YOL005C 363 nt3.49□□□□□ -1.85
SSL1Q04673 URB2YJR041C 3525 nt3.49□□□□□ -1.85
SSL1Q04673 ARG2YJL071W 1725 nt3.48□□□□□ -1.85
SSL1Q04673 HFM1YGL251C 3564 nt3.48□□□□□ -1.85
SSL1Q04673 YER076W-AYER076W-A 348 nt3.48□□□□□ -1.85
SSL1Q04673 YIR040CYIR040C 333 nt3.48□□□□□ -1.85
SSL1Q04673 YAR029WYAR029W 225 nt3.48□□□□□ -1.85
SSL1Q04673 RPL37AYLR185W 267 nt3.48□□□□□ -1.85
SSL1Q04673 URA10YMR271C 684 nt3.48□□□□□ -1.85
SSL1Q04673 BIL1YOR304C-A 231 nt3.48□□□□□ -1.85
SSL1Q04673 YBR137WYBR137W 540 nt3.48□□□□□ -1.85
SSL1Q04673 YSW1YBR148W 1830 nt3.48□□□□□ -1.85
SSL1Q04673 YGR237CYGR237C 2358 nt3.48□□□□□ -1.85
Retrieved 100 of 7,029 protein–RNA pairs in 243.9 ms