Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.48■□□□□ 0.71
TRA2BP62995 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
TRA2BP62995 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRA2BP62995 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRA2BP62995 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.48■□□□□ 0.71
TRA2BP62995 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRA2BP62995 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRA2BP62995 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRA2BP62995 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.48■□□□□ 0.71
TRA2BP62995 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
TRA2BP62995 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRA2BP62995 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRA2BP62995 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRA2BP62995 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TRA2BP62995 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRA2BP62995 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRA2BP62995 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRA2BP62995 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRA2BP62995 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRA2BP62995 GABARAPL3-202ENST00000624044 1851 ntBASIC19.47■□□□□ 0.71
TRA2BP62995 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.47■□□□□ 0.71
TRA2BP62995 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TRA2BP62995 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRA2BP62995 LINC01521-201ENST00000504184 1943 ntBASIC19.47■□□□□ 0.71
TRA2BP62995 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRA2BP62995 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.46■□□□□ 0.71
TRA2BP62995 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRA2BP62995 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.46■□□□□ 0.71
TRA2BP62995 FP700111.2-201ENST00000619190 1892 ntBASIC19.46■□□□□ 0.71
TRA2BP62995 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
TRA2BP62995 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TRA2BP62995 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRA2BP62995 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
TRA2BP62995 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.46■□□□□ 0.71
TRA2BP62995 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.46■□□□□ 0.71
TRA2BP62995 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.46■□□□□ 0.71
TRA2BP62995 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.46■□□□□ 0.71
TRA2BP62995 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
TRA2BP62995 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
TRA2BP62995 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRA2BP62995 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.46■□□□□ 0.71
TRA2BP62995 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
TRA2BP62995 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRA2BP62995 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRA2BP62995 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRA2BP62995 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRA2BP62995 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRA2BP62995 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRA2BP62995 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.45■□□□□ 0.7
TRA2BP62995 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRA2BP62995 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRA2BP62995 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRA2BP62995 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRA2BP62995 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
TRA2BP62995 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.45■□□□□ 0.7
TRA2BP62995 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.45■□□□□ 0.7
TRA2BP62995 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRA2BP62995 AC007322.4-201ENST00000509611 723 ntBASIC19.45■□□□□ 0.7
TRA2BP62995 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
TRA2BP62995 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.45■□□□□ 0.7
TRA2BP62995 MIR2861-201ENST00000636310 90 ntBASIC19.45■□□□□ 0.7
TRA2BP62995 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRA2BP62995 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.45■□□□□ 0.7
TRA2BP62995 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRA2BP62995 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRA2BP62995 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
TRA2BP62995 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
TRA2BP62995 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TRA2BP62995 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.44■□□□□ 0.7
TRA2BP62995 AP005212.1-201ENST00000581547 1997 ntBASIC19.44■□□□□ 0.7
TRA2BP62995 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
TRA2BP62995 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRA2BP62995 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.44■□□□□ 0.7
TRA2BP62995 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRA2BP62995 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRA2BP62995 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.44■□□□□ 0.7
TRA2BP62995 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRA2BP62995 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.44■□□□□ 0.7
TRA2BP62995 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.44■□□□□ 0.7
TRA2BP62995 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.44■□□□□ 0.7
TRA2BP62995 AL162412.1-201ENST00000567129 965 ntBASIC19.44■□□□□ 0.7
TRA2BP62995 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.44■□□□□ 0.7
TRA2BP62995 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRA2BP62995 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRA2BP62995 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRA2BP62995 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRA2BP62995 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRA2BP62995 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRA2BP62995 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRA2BP62995 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.44■□□□□ 0.7
TRA2BP62995 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRA2BP62995 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRA2BP62995 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.44■□□□□ 0.7
TRA2BP62995 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TRA2BP62995 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRA2BP62995 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.43■□□□□ 0.7
TRA2BP62995 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRA2BP62995 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRA2BP62995 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRA2BP62995 AC016769.1-201ENST00000409132 1010 ntBASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 438.6 ms