Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
UBA52P62987 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.69■□□□□ 0.42
UBA52P62987 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.69■□□□□ 0.42
UBA52P62987 AC080038.1-201ENST00000611274 1154 ntBASIC17.69■□□□□ 0.42
UBA52P62987 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBA52P62987 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBA52P62987 LINC01529-204ENST00000636474 1715 ntBASIC17.69■□□□□ 0.42
UBA52P62987 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBA52P62987 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBA52P62987 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.69■□□□□ 0.42
UBA52P62987 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.69■□□□□ 0.42
UBA52P62987 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
UBA52P62987 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBA52P62987 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBA52P62987 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBA52P62987 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC17.68■□□□□ 0.42
UBA52P62987 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBA52P62987 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.68■□□□□ 0.42
UBA52P62987 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBA52P62987 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.68■□□□□ 0.42
UBA52P62987 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.68■□□□□ 0.42
UBA52P62987 AC087289.5-201ENST00000586076 3175 ntBASIC17.68■□□□□ 0.42
UBA52P62987 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBA52P62987 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UBA52P62987 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
UBA52P62987 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBA52P62987 AC016769.1-201ENST00000409132 1010 ntBASIC17.68■□□□□ 0.42
UBA52P62987 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UBA52P62987 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.68■□□□□ 0.42
UBA52P62987 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UBA52P62987 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.68■□□□□ 0.42
UBA52P62987 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBA52P62987 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
UBA52P62987 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
UBA52P62987 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC17.68■□□□□ 0.42
UBA52P62987 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.68■□□□□ 0.42
UBA52P62987 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBA52P62987 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBA52P62987 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBA52P62987 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBA52P62987 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.67■□□□□ 0.42
UBA52P62987 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBA52P62987 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBA52P62987 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
UBA52P62987 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
UBA52P62987 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBA52P62987 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
UBA52P62987 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.67■□□□□ 0.42
UBA52P62987 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBA52P62987 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBA52P62987 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.67■□□□□ 0.42
UBA52P62987 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBA52P62987 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.67■□□□□ 0.42
UBA52P62987 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBA52P62987 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.67■□□□□ 0.42
UBA52P62987 AC137761.2-201ENST00000561729 223 ntBASIC17.67■□□□□ 0.42
UBA52P62987 AC145350.3-201ENST00000569033 163 ntBASIC17.67■□□□□ 0.42
UBA52P62987 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBA52P62987 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
UBA52P62987 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
UBA52P62987 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.67■□□□□ 0.42
UBA52P62987 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.67■□□□□ 0.42
UBA52P62987 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBA52P62987 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.67■□□□□ 0.42
UBA52P62987 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.67■□□□□ 0.42
UBA52P62987 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.67■□□□□ 0.42
UBA52P62987 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
UBA52P62987 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBA52P62987 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBA52P62987 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBA52P62987 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBA52P62987 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBA52P62987 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBA52P62987 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
UBA52P62987 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBA52P62987 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBA52P62987 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBA52P62987 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBA52P62987 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
UBA52P62987 AC006015.1-201ENST00000429970 570 ntBASIC17.66■□□□□ 0.42
UBA52P62987 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.66■□□□□ 0.42
UBA52P62987 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.66■□□□□ 0.42
UBA52P62987 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBA52P62987 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UBA52P62987 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBA52P62987 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBA52P62987 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBA52P62987 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.65■□□□□ 0.42
UBA52P62987 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UBA52P62987 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
UBA52P62987 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.65■□□□□ 0.42
UBA52P62987 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBA52P62987 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UBA52P62987 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.65■□□□□ 0.42
UBA52P62987 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.65■□□□□ 0.42
UBA52P62987 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.65■□□□□ 0.42
UBA52P62987 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBA52P62987 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBA52P62987 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBA52P62987 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms