Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMIM11AP58511 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMIM11AP58511 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SMIM11AP58511 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMIM11AP58511 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMIM11AP58511 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SMIM11AP58511 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SMIM11AP58511 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.98■□□□□ 0.63
SMIM11AP58511 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMIM11AP58511 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.98■□□□□ 0.63
SMIM11AP58511 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMIM11AP58511 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.98■□□□□ 0.63
SMIM11AP58511 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.98■□□□□ 0.63
SMIM11AP58511 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.98■□□□□ 0.63
SMIM11AP58511 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.98■□□□□ 0.63
SMIM11AP58511 AC027682.1-201ENST00000562846 899 ntBASIC18.98■□□□□ 0.63
SMIM11AP58511 EEF1DP3-203ENST00000566025 782 ntBASIC18.98■□□□□ 0.63
SMIM11AP58511 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.98■□□□□ 0.63
SMIM11AP58511 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMIM11AP58511 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMIM11AP58511 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMIM11AP58511 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SMIM11AP58511 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMIM11AP58511 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.98■□□□□ 0.63
SMIM11AP58511 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
SMIM11AP58511 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.98■□□□□ 0.63
SMIM11AP58511 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMIM11AP58511 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
SMIM11AP58511 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMIM11AP58511 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMIM11AP58511 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SMIM11AP58511 TSPY26P-201ENST00000476365 1326 ntBASIC18.98■□□□□ 0.63
SMIM11AP58511 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMIM11AP58511 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
SMIM11AP58511 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
SMIM11AP58511 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMIM11AP58511 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SMIM11AP58511 AC099791.1-201ENST00000416440 715 ntBASIC18.97■□□□□ 0.63
SMIM11AP58511 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SMIM11AP58511 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMIM11AP58511 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.97■□□□□ 0.63
SMIM11AP58511 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.97■□□□□ 0.63
SMIM11AP58511 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.97■□□□□ 0.63
SMIM11AP58511 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.97■□□□□ 0.63
SMIM11AP58511 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMIM11AP58511 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.97■□□□□ 0.63
SMIM11AP58511 AL162377.1-201ENST00000618844 1793 ntBASIC18.96■□□□□ 0.63
SMIM11AP58511 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SMIM11AP58511 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.96■□□□□ 0.63
SMIM11AP58511 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMIM11AP58511 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMIM11AP58511 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMIM11AP58511 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMIM11AP58511 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SMIM11AP58511 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.96■□□□□ 0.63
SMIM11AP58511 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SMIM11AP58511 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
SMIM11AP58511 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SMIM11AP58511 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SMIM11AP58511 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMIM11AP58511 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SMIM11AP58511 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMIM11AP58511 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SMIM11AP58511 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.96■□□□□ 0.63
SMIM11AP58511 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMIM11AP58511 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMIM11AP58511 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.95■□□□□ 0.62
SMIM11AP58511 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
SMIM11AP58511 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SMIM11AP58511 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SMIM11AP58511 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SMIM11AP58511 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMIM11AP58511 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMIM11AP58511 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMIM11AP58511 MIR572-201ENST00000384983 95 ntBASIC18.95■□□□□ 0.62
SMIM11AP58511 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.95■□□□□ 0.62
SMIM11AP58511 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMIM11AP58511 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SMIM11AP58511 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.95■□□□□ 0.62
SMIM11AP58511 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMIM11AP58511 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.95■□□□□ 0.62
SMIM11AP58511 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SMIM11AP58511 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMIM11AP58511 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.94■□□□□ 0.62
SMIM11AP58511 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.94■□□□□ 0.62
SMIM11AP58511 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.94■□□□□ 0.62
SMIM11AP58511 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.94■□□□□ 0.62
SMIM11AP58511 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.94■□□□□ 0.62
SMIM11AP58511 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.94■□□□□ 0.62
SMIM11AP58511 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.94■□□□□ 0.62
SMIM11AP58511 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.94■□□□□ 0.62
SMIM11AP58511 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.94■□□□□ 0.62
SMIM11AP58511 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SMIM11AP58511 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.94■□□□□ 0.62
SMIM11AP58511 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SMIM11AP58511 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.94■□□□□ 0.62
SMIM11AP58511 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMIM11AP58511 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SMIM11AP58511 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.93■□□□□ 0.62
SMIM11AP58511 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms