Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
CLDN18P56856 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN18P56856 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.48■□□□□ 0.55
CLDN18P56856 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN18P56856 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN18P56856 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN18P56856 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN18P56856 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.47■□□□□ 0.55
CLDN18P56856 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN18P56856 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
CLDN18P56856 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN18P56856 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN18P56856 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.47■□□□□ 0.55
CLDN18P56856 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN18P56856 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN18P56856 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN18P56856 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN18P56856 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN18P56856 LSM12P1-201ENST00000411836 588 ntBASIC18.47■□□□□ 0.55
CLDN18P56856 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN18P56856 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.47■□□□□ 0.55
CLDN18P56856 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.47■□□□□ 0.55
CLDN18P56856 KRT18P6-201ENST00000555540 1265 ntBASIC18.47■□□□□ 0.55
CLDN18P56856 MYC-209ENST00000641252 345 ntBASIC18.47■□□□□ 0.55
CLDN18P56856 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN18P56856 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN18P56856 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN18P56856 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.47■□□□□ 0.55
CLDN18P56856 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.47■□□□□ 0.55
CLDN18P56856 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CLDN18P56856 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN18P56856 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN18P56856 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CLDN18P56856 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CLDN18P56856 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN18P56856 AL049796.1-201ENST00000565336 1766 ntBASIC18.46■□□□□ 0.55
CLDN18P56856 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN18P56856 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN18P56856 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN18P56856 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CLDN18P56856 DUSP5P2-201ENST00000426873 1033 ntBASIC18.46■□□□□ 0.55
CLDN18P56856 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
CLDN18P56856 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.46■□□□□ 0.55
CLDN18P56856 AC091874.3-201ENST00000512672 1195 ntBASIC18.46■□□□□ 0.55
CLDN18P56856 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.46■□□□□ 0.55
CLDN18P56856 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.46■□□□□ 0.55
CLDN18P56856 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CLDN18P56856 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.46■□□□□ 0.55
CLDN18P56856 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.46■□□□□ 0.55
CLDN18P56856 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN18P56856 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN18P56856 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN18P56856 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CLDN18P56856 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN18P56856 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN18P56856 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.54
CLDN18P56856 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.45■□□□□ 0.54
CLDN18P56856 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN18P56856 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN18P56856 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN18P56856 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.45■□□□□ 0.54
CLDN18P56856 FEM1AP4-201ENST00000443167 1987 ntBASIC18.45■□□□□ 0.54
CLDN18P56856 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CLDN18P56856 KRT18P68-201ENST00000392293 1000 ntBASIC18.45■□□□□ 0.54
CLDN18P56856 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.45■□□□□ 0.54
CLDN18P56856 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.45■□□□□ 0.54
CLDN18P56856 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.45■□□□□ 0.54
CLDN18P56856 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.45■□□□□ 0.54
CLDN18P56856 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CLDN18P56856 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN18P56856 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.45■□□□□ 0.54
CLDN18P56856 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN18P56856 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
CLDN18P56856 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN18P56856 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.45■□□□□ 0.54
CLDN18P56856 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.45■□□□□ 0.54
CLDN18P56856 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN18P56856 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.45■□□□□ 0.54
CLDN18P56856 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN18P56856 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN18P56856 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.44■□□□□ 0.54
CLDN18P56856 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN18P56856 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN18P56856 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
CLDN18P56856 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
CLDN18P56856 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.44■□□□□ 0.54
CLDN18P56856 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN18P56856 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CLDN18P56856 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.44■□□□□ 0.54
CLDN18P56856 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.44■□□□□ 0.54
CLDN18P56856 CD99P1-205ENST00000527459 561 ntBASIC18.44■□□□□ 0.54
CLDN18P56856 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.44■□□□□ 0.54
CLDN18P56856 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
CLDN18P56856 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.44■□□□□ 0.54
CLDN18P56856 AC083880.1-201ENST00000608266 535 ntBASIC18.44■□□□□ 0.54
CLDN18P56856 AL589743.5-201ENST00000616611 1050 ntBASIC18.44■□□□□ 0.54
CLDN18P56856 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN18P56856 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.44■□□□□ 0.54
CLDN18P56856 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.44■□□□□ 0.54
CLDN18P56856 AC011484.1-201ENST00000377652 1995 ntBASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms