Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 RBM17P2-201ENST00000616397 1405 ntBASIC21.65■■□□□ 1.06
ATXN1P54253 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ATXN1P54253 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.65■■□□□ 1.06
ATXN1P54253 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ATXN1P54253 AC073210.2-201ENST00000430369 194 ntBASIC21.65■■□□□ 1.06
ATXN1P54253 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
ATXN1P54253 AC005181.1-201ENST00000604782 1256 ntBASIC21.65■■□□□ 1.06
ATXN1P54253 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATXN1P54253 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.65■■□□□ 1.06
ATXN1P54253 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ATXN1P54253 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ATXN1P54253 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.64■■□□□ 1.06
ATXN1P54253 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
ATXN1P54253 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
ATXN1P54253 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
ATXN1P54253 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.64■■□□□ 1.05
ATXN1P54253 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
ATXN1P54253 AL596275.1-201ENST00000423464 877 ntBASIC21.64■■□□□ 1.05
ATXN1P54253 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
ATXN1P54253 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
ATXN1P54253 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
ATXN1P54253 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
ATXN1P54253 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
ATXN1P54253 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ATXN1P54253 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ATXN1P54253 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
ATXN1P54253 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
ATXN1P54253 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ATXN1P54253 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
ATXN1P54253 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ATXN1P54253 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATXN1P54253 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.63■■□□□ 1.05
ATXN1P54253 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATXN1P54253 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.63■■□□□ 1.05
ATXN1P54253 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ATXN1P54253 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATXN1P54253 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATXN1P54253 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
ATXN1P54253 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
ATXN1P54253 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.63■■□□□ 1.05
ATXN1P54253 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ATXN1P54253 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
ATXN1P54253 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ATXN1P54253 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.63■■□□□ 1.05
ATXN1P54253 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.63■■□□□ 1.05
ATXN1P54253 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.63■■□□□ 1.05
ATXN1P54253 PLK5-205ENST00000642079 1969 ntBASIC21.63■■□□□ 1.05
ATXN1P54253 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.63■■□□□ 1.05
ATXN1P54253 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATXN1P54253 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.63■■□□□ 1.05
ATXN1P54253 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATXN1P54253 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATXN1P54253 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATXN1P54253 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ATXN1P54253 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATXN1P54253 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATXN1P54253 AC007322.1-201ENST00000426983 750 ntBASIC21.62■■□□□ 1.05
ATXN1P54253 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.62■■□□□ 1.05
ATXN1P54253 AC010536.3-201ENST00000620306 533 ntBASIC21.62■■□□□ 1.05
ATXN1P54253 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATXN1P54253 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.62■■□□□ 1.05
ATXN1P54253 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATXN1P54253 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATXN1P54253 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATXN1P54253 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
ATXN1P54253 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.62■■□□□ 1.05
ATXN1P54253 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ATXN1P54253 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.62■■□□□ 1.05
ATXN1P54253 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ATXN1P54253 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.61■■□□□ 1.05
ATXN1P54253 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
ATXN1P54253 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ATXN1P54253 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.61■■□□□ 1.05
ATXN1P54253 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ATXN1P54253 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ATXN1P54253 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ATXN1P54253 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.61■■□□□ 1.05
ATXN1P54253 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ATXN1P54253 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.61■■□□□ 1.05
ATXN1P54253 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.61■■□□□ 1.05
ATXN1P54253 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ATXN1P54253 AC245052.3-201ENST00000450182 901 ntBASIC21.61■■□□□ 1.05
ATXN1P54253 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
ATXN1P54253 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ATXN1P54253 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.61■■□□□ 1.05
ATXN1P54253 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.61■■□□□ 1.05
ATXN1P54253 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
ATXN1P54253 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ATXN1P54253 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATXN1P54253 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATXN1P54253 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATXN1P54253 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATXN1P54253 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ATXN1P54253 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATXN1P54253 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATXN1P54253 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.6■■□□□ 1.05
ATXN1P54253 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.6■■□□□ 1.05
ATXN1P54253 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATXN1P54253 DUX4L16-201ENST00000555130 1264 ntBASIC21.6■■□□□ 1.05
ATXN1P54253 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms