Protein–RNA interactions for Protein: P53999

SUB1, Activated RNA polymerase II transcriptional coactivator p15, humanhuman

Known RBP eCLIP

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P53999 TUBA1C-208ENST00000552125 575 ntTSL 47.98□□□□□ -1.131e-8■■■■□ 22.4
SUB1P53999 EIF2D-201ENST00000271764 2005 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.171e-8■■■■□ 22.4
SUB1P53999 AL139260.3-201ENST00000489803 3231 ntTSL 27.71□□□□□ -1.171e-8■■■■□ 22.4
SUB1P53999 MORF4L2-201ENST00000360458 1824 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.291e-9■■■■□ 22.4
SUB1P53999 KIAA0368-203ENST00000374383 573 ntAPPRIS ALT2 TSL 26.97□□□□□ -1.293e-16■■■■□ 22.4
SUB1P53999 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC6.84□□□□□ -1.311e-8■■■■□ 22.4
SUB1P53999 TUBA1C-204ENST00000549183 696 ntTSL 2 BASIC6.62□□□□□ -1.351e-8■■■■□ 22.4
SUB1P53999 MORF4L2-203ENST00000422154 1983 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.351e-9■■■■□ 22.4
SUB1P53999 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.411e-9■■■■□ 22.4
SUB1P53999 MORF4L2-208ENST00000441076 1828 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.421e-9■■■■□ 22.4
SUB1P53999 MORF4L2-210ENST00000451301 1830 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.421e-9■■■■□ 22.4
SUB1P53999 EIF2D-203ENST00000437518 920 ntTSL 36.14□□□□□ -1.431e-8■■■■□ 22.4
SUB1P53999 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.14□□□□□ -1.751e-8■■■■□ 22.4
SUB1P53999 EED-204ENST00000524673 1155 ntTSL 33.52□□□□□ -1.851e-8■■■■□ 22.4
SUB1P53999 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.38□□□□□ -1.871e-8■■■■□ 22.4
SUB1P53999 EED-208ENST00000528250 1235 ntTSL 23.37□□□□□ -1.871e-8■■■■□ 22.4
SUB1P53999 AL139260.3-203ENST00000489575 477 ntTSL 22.47□□□□□ -2.011e-8■■■■□ 22.4
SUB1P53999 MYCBP-202ENST00000465771 341 ntTSL 32.43□□□□□ -2.021e-8■■■■□ 22.4
SUB1P53999 HNRNPH1-231ENST00000519033 832 ntTSL 312.94□□□□□ -0.342e-26■■■■□ 22.4
SUB1P53999 EIF4G2-225ENST00000532383 6769 ntTSL 1 (best)8.7□□□□□ -1.022e-13■■■■□ 22.4
SUB1P53999 EIF4G2-201ENST00000339995 3978 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.162e-13■■■■□ 22.4
SUB1P53999 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.392e-13■■■■□ 22.4
SUB1P53999 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.392e-13■■■■□ 22.4
SUB1P53999 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.432e-13■■■■□ 22.4
SUB1P53999 LETMD1-236ENST00000553043 727 ntTSL 24.84□□□□□ -1.632e-15■■■■□ 22.4
SUB1P53999 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.285e-7■■■■□ 22.4
SUB1P53999 DHRS1-210ENST00000561273 2027 ntTSL 512.81□□□□□ -0.365e-7■■■■□ 22.4
SUB1P53999 DHRS1-204ENST00000558340 1623 ntTSL 511.02□□□□□ -0.645e-7■■■■□ 22.4
SUB1P53999 DHRS1-206ENST00000559088 719 ntTSL 310.83□□□□□ -0.685e-7■■■■□ 22.4
SUB1P53999 DHRS1-211ENST00000561281 1181 ntTSL 1 (best)10.64□□□□□ -0.715e-7■■■■□ 22.4
SUB1P53999 DHRS1-202ENST00000396813 1470 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.965e-7■■■■□ 22.4
SUB1P53999 DHRS1-209ENST00000561137 2660 ntTSL 29.01□□□□□ -0.975e-7■■■■□ 22.4
SUB1P53999 DHRS1-205ENST00000559084 528 nt8.91□□□□□ -0.985e-7■■■■□ 22.4
SUB1P53999 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC16.53■□□□□ 0.242e-6■■■■□ 22.3
SUB1P53999 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.082e-6■■■■□ 22.3
SUB1P53999 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC13.63□□□□□ -0.232e-6■■■■□ 22.3
SUB1P53999 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.06□□□□□ -0.322e-6■■■■□ 22.3
SUB1P53999 B2M-204ENST00000558401 1715 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.136e-10■■■■□ 22.3
SUB1P53999 B2M-202ENST00000544417 933 ntTSL 5 BASIC7.95□□□□□ -1.146e-10■■■■□ 22.3
SUB1P53999 B2M-212ENST00000561424 604 ntTSL 36.55□□□□□ -1.366e-10■■■■□ 22.3
SUB1P53999 B2M-213ENST00000623550 2329 nt5.47□□□□□ -1.536e-10■■■■□ 22.3
SUB1P53999 B2M-205ENST00000559220 580 ntTSL 54.79□□□□□ -1.646e-10■■■■□ 22.3
SUB1P53999 B2M-211ENST00000561139 717 ntTSL 33.32□□□□□ -1.886e-10■■■■□ 22.3
SUB1P53999 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC9.8□□□□□ -0.843e-20■■■■□ 22.3
SUB1P53999 SNHG6-204ENST00000521127 560 ntTSL 213.28□□□□□ -0.281e-30■■■■□ 22.3
SUB1P53999 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.198e-9■■■■□ 22.2
SUB1P53999 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.288e-9■■■■□ 22.2
SUB1P53999 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC13.55□□□□□ -0.243e-6■■■■□ 22.2
SUB1P53999 DAD1-205ENST00000543337 501 ntTSL 3 BASIC12.17□□□□□ -0.463e-8■■■■□ 22.2
SUB1P53999 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.893e-8■■■■□ 22.2
SUB1P53999 DAD1-204ENST00000538631 441 ntTSL 2 BASIC7.08□□□□□ -1.283e-8■■■■□ 22.2
SUB1P53999 DAD1-203ENST00000535847 591 ntTSL 26.74□□□□□ -1.333e-8■■■■□ 22.2
SUB1P53999 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.356e-8■■■■□ 22.2
SUB1P53999 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC10.19□□□□□ -0.786e-8■■■■□ 22.2
SUB1P53999 ILF3-220ENST00000590869 531 ntTSL 59.55□□□□□ -0.886e-8■■■■□ 22.2
SUB1P53999 ILF3-202ENST00000407004 3671 ntTSL 1 (best) BASIC9.29□□□□□ -0.926e-8■■■■□ 22.2
SUB1P53999 ILF3-222ENST00000592763 3866 ntTSL 5 BASIC8.88□□□□□ -0.996e-8■■■■□ 22.2
SUB1P53999 MTHFD2-201ENST00000394053 4456 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.934e-7■■■■□ 22.2
SUB1P53999 NCAPD2-207ENST00000539084 4290 ntTSL 29.47□□□□□ -0.892e-6■■■■□ 22.2
SUB1P53999 PSMD13-211ENST00000532025 653 ntTSL 312.88□□□□□ -0.352e-7■■■■□ 22.2
SUB1P53999 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.933e-7■■■■□ 22.1
SUB1P53999 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC14.09□□□□□ -0.152e-6■■■■□ 22.1
SUB1P53999 INSIG1-206ENST00000476756 1320 ntTSL 28.51□□□□□ -1.052e-6■■■■□ 22.1
SUB1P53999 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.924e-7■■■■□ 22.1
SUB1P53999 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.63■□□□□ 0.894e-7■■■■□ 22.1
SUB1P53999 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.61e-16■■■■□ 22.1
SUB1P53999 RPL14-203ENST00000416518 812 ntTSL 3 BASIC9.06□□□□□ -0.961e-16■■■■□ 22.1
SUB1P53999 RPL14-208ENST00000479563 794 ntTSL 1 (best)6.99□□□□□ -1.291e-16■■■■□ 22.1
SUB1P53999 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.341e-16■■■■□ 22.1
SUB1P53999 PRMT5-218ENST00000555454 771 ntTSL 55.74□□□□□ -1.492e-9■■■■□ 22.1
SUB1P53999 PRMT5-206ENST00000454731 617 ntTSL 34.97□□□□□ -1.612e-9■■■■□ 22.1
SUB1P53999 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC11.27□□□□□ -0.69e-7■■■■□ 22.1
SUB1P53999 C22orf34-205ENST00000416411 542 ntTSL 410.66□□□□□ -0.79e-7■■■■□ 22.1
SUB1P53999 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.611e-6■■■■□ 22.1
SUB1P53999 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.451e-6■■■■□ 22.1
SUB1P53999 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.221e-6■■■■□ 22.1
SUB1P53999 PTOV1-203ENST00000594165 986 ntTSL 314.72□□□□□ -0.051e-6■■■■□ 22.1
SUB1P53999 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC12.59□□□□□ -0.391e-6■■■■□ 22.1
SUB1P53999 PTOV1-210ENST00000598325 1438 ntTSL 512.14□□□□□ -0.471e-6■■■■□ 22.1
SUB1P53999 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC11.26□□□□□ -0.611e-6■■■■□ 22.1
SUB1P53999 PTOV1-202ENST00000594151 995 ntTSL 510.53□□□□□ -0.721e-6■■■■□ 22.1
SUB1P53999 PTOV1-218ENST00000601612 1480 ntTSL 210.37□□□□□ -0.751e-6■■■■□ 22.1
SUB1P53999 PTOV1-215ENST00000600793 426 ntTSL 59.46□□□□□ -0.91e-6■■■■□ 22.1
SUB1P53999 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC14.95□□□□□ -0.022e-6■■■■□ 22.1
SUB1P53999 LUC7L2-204ENST00000456182 2411 ntTSL 1 (best)14.55□□□□□ -0.082e-6■■■■□ 22.1
SUB1P53999 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.212e-6■■■■□ 22.1
SUB1P53999 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC10.48□□□□□ -0.732e-6■■■■□ 22.1
SUB1P53999 C7orf55-LUC7L2-201ENST00000541515 1661 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.132e-6■■■■□ 22.1
SUB1P53999 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC5.68□□□□□ -1.52e-6■■■■□ 22.1
SUB1P53999 LUC7L2-206ENST00000482860 2599 ntTSL 24□□□□□ -1.772e-6■■■■□ 22.1
SUB1P53999 LUC7L2-207ENST00000498518 2837 ntTSL 23.24□□□□□ -1.892e-6■■■■□ 22.1
SUB1P53999 WBP11-201ENST00000261167 4646 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.763e-12■■■■□ 22
SUB1P53999 HNRNPH1-240ENST00000521720 539 ntTSL 312.65□□□□□ -0.385e-73■■■■□ 22
SUB1P53999 HNRNPH1-205ENST00000502632 1509 ntTSL 212.2□□□□□ -0.465e-73■■■■□ 22
SUB1P53999 GDI2-205ENST00000447751 834 ntTSL 32.54□□□□□ -23e-24■■■■□ 22
SUB1P53999 AAMP-207ENST00000465442 1016 ntTSL 215.4■□□□□ 0.066e-6■■■■□ 21.9
SUB1P53999 ARAP1-210ENST00000465814 5612 ntTSL 213.58□□□□□ -0.236e-6■■■■□ 21.9
SUB1P53999 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.346e-6■■■■□ 21.9
SUB1P53999 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.391e-7■■■■□ 21.9
SUB1P53999 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.436e-6■■■■□ 21.9
Retrieved 100 of 11,644 protein–RNA pairs in 176.5 ms