RNA–Protein interactions for RNA: ENST00000528250.1

EED-208, Transcript of embryonic ectoderm development, humanhuman

TSL 2

Gene EED, Length 1,235 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EED-208ENST00000528250 AEBP2Q6ZN18 517 aaPredicted RBP24.66■■□□□ 1.54
EED-208ENST00000528250 CHIC1Q5VXU3 224 aa24.41■■□□□ 1.5
EED-208ENST00000528250 PHF23Q9BUL5 403 aaPredicted RBP21.56■■□□□ 1.04
EED-208ENST00000528250 SENP3Q9H4L4 574 aaPredicted RBP20.78■□□□□ 0.92
EED-208ENST00000528250 PLPPR3Q6T4P5 718 aa19.96■□□□□ 0.79
EED-208ENST00000528250 FOXD1Q16676 465 aa19.28■□□□□ 0.68
EED-208ENST00000528250 PPP6R1Q9UPN7 881 aa18.9■□□□□ 0.62
EED-208ENST00000528250 ADRA2BP18089 450 aa18.89■□□□□ 0.61
EED-208ENST00000528250 PIAS4Q8N2W9 510 aaPredicted RBP18.25■□□□□ 0.51
EED-208ENST00000528250 MSH5O43196 834 aa17.95■□□□□ 0.46
EED-208ENST00000528250 POTEDQ86YR6 584 aa17.82■□□□□ 0.44
EED-208ENST00000528250 KCNA4P22459 653 aa17.74■□□□□ 0.43
EED-208ENST00000528250 PPP4R3CPQ6ZMV5 832 aa17.66■□□□□ 0.42
EED-208ENST00000528250 NCBP3Q53F19 620 aaKnown RBP17.26■□□□□ 0.35
EED-208ENST00000528250 SCAF1Q9H7N4 1312 aaKnown RBP17.17■□□□□ 0.34
EED-208ENST00000528250 NPM3O75607 178 aaKnown RBP17.08■□□□□ 0.32
EED-208ENST00000528250 CNKSR2Q8WXI2 1034 aa17.05■□□□□ 0.32
EED-208ENST00000528250 MAPK8IP2Q13387 824 aaPredicted RBP17.03■□□□□ 0.32
EED-208ENST00000528250 SLC4A1APQ9BWU0 796 aaKnown RBP16.92■□□□□ 0.3
EED-208ENST00000528250 EHMT2Q96KQ7 1210 aa16.91■□□□□ 0.3
EED-208ENST00000528250 DMRT2Q9Y5R5 561 aa16.67■□□□□ 0.26
EED-208ENST00000528250 RNF216Q9NWF9 866 aaPredicted RBP16.63■□□□□ 0.25
EED-208ENST00000528250 CSRNP3Q8WYN3 585 aa16.56■□□□□ 0.24
EED-208ENST00000528250 DNAJC5BQ9UF47 199 aa16.5■□□□□ 0.23
EED-208ENST00000528250 HOXD11P31277 338 aaPredicted RBP16.47■□□□□ 0.23
EED-208ENST00000528250 ZBTB22O15209 634 aa16.37■□□□□ 0.21
EED-208ENST00000528250 FOXD4L1Q9NU39 408 aa16.16■□□□□ 0.18
EED-208ENST00000528250 SLC4A2P04920 1241 aa16.06■□□□□ 0.16
EED-208ENST00000528250 DCAF8L1A6NGE4 600 aa15.9■□□□□ 0.14
EED-208ENST00000528250 MYCNP04198 464 aaPredicted RBP15.73■□□□□ 0.11
EED-208ENST00000528250 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.68■□□□□ 0.1
EED-208ENST00000528250 ATXN8OSP0DMR3 200 aa15.54■□□□□ 0.08
EED-208ENST00000528250 U3KPZ7 1027 aaPredicted RBP15.51■□□□□ 0.07
EED-208ENST00000528250 CACNB1Q02641 598 aaPredicted RBP15.5■□□□□ 0.07
EED-208ENST00000528250 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.36■□□□□ 0.05
EED-208ENST00000528250 HNRNPUL2Q1KMD3 747 aaKnown RBP15.36■□□□□ 0.05
EED-208ENST00000528250 SAMD1Q6SPF0 538 aaPredicted RBP15.36■□□□□ 0.05
EED-208ENST00000528250 ATF5Q9Y2D1 282 aaPredicted RBP15.36■□□□□ 0.05
EED-208ENST00000528250 RNF39Q9H2S5 420 aa15.28■□□□□ 0.04
EED-208ENST00000528250 APLP2Q06481 763 aa15.08■□□□□ 0
EED-208ENST00000528250 C1QBPQ07021 282 aaKnown RBP15.06■□□□□ 0
EED-208ENST00000528250 ZNF219Q9P2Y4 722 aaPredicted RBP15.02■□□□□ -0
EED-208ENST00000528250 SPINK5Q9NQ38 1064 aaPredicted RBP14.98□□□□□ -0.01
EED-208ENST00000528250 FKBP8Q14318 412 aa14.91□□□□□ -0.02
EED-208ENST00000528250 TRHP20396 242 aaPredicted RBP14.89□□□□□ -0.03
EED-208ENST00000528250 CAPN15O75808 1086 aa14.84□□□□□ -0.03
EED-208ENST00000528250 POLA2Q14181 598 aa14.74□□□□□ -0.05
EED-208ENST00000528250 MKRN4PQ13434 485 aaPredicted RBP14.71□□□□□ -0.05
EED-208ENST00000528250 ABCB7O75027 752 aa14.63□□□□□ -0.07
EED-208ENST00000528250 FBLN2P98095 1184 aa14.59□□□□□ -0.07
EED-208ENST00000528250 DSG3P32926 999 aa14.54□□□□□ -0.08
EED-208ENST00000528250 SPDYE4A6NLX3 237 aa14.51□□□□□ -0.09
EED-208ENST00000528250 ZBTB12Q9Y330 459 aaPredicted RBP14.47□□□□□ -0.09
EED-208ENST00000528250 PROM2Q8N271 834 aa14.36□□□□□ -0.11
EED-208ENST00000528250 RTN4Q9NQC3 1192 aaKnown RBP14.29□□□□□ -0.12
EED-208ENST00000528250 AMER1Q5JTC6 1135 aaPredicted RBP14.24□□□□□ -0.13
EED-208ENST00000528250 OSCARQ8IYS5 282 aa14.24□□□□□ -0.13
EED-208ENST00000528250 FBXO3Q9UK99 471 aa14.22□□□□□ -0.13
EED-208ENST00000528250 ZNF692Q9BU19 519 aaPredicted RBP14.15□□□□□ -0.14
EED-208ENST00000528250 SPDYE2BA6NHP3 402 aa14.14□□□□□ -0.15
EED-208ENST00000528250 SPDYE6P0CI01 402 aa14.14□□□□□ -0.15
EED-208ENST00000528250 SPDYE2Q495Y8 402 aa14.14□□□□□ -0.15
EED-208ENST00000528250 SSUH2Q9Y2M2 353 aa14.11□□□□□ -0.15
EED-208ENST00000528250 VASPP50552 380 aaPredicted RBP14.07□□□□□ -0.16
EED-208ENST00000528250 PABPN1Q86U42 306 aaKnown RBP eCLIP14□□□□□ -0.17
EED-208ENST00000528250 POTEHQ6S545 545 aa13.93□□□□□ -0.18
EED-208ENST00000528250 IFNLR1Q8IU57 520 aaPredicted RBP13.93□□□□□ -0.18
EED-208ENST00000528250 STAG3Q9UJ98 1225 aa13.85□□□□□ -0.19
EED-208ENST00000528250 RBM42Q9BTD8 480 aaKnown RBP13.78□□□□□ -0.2
EED-208ENST00000528250 AKT1S1Q96B36 256 aa13.73□□□□□ -0.21
EED-208ENST00000528250 PLCD3Q8N3E9 789 aa13.72□□□□□ -0.21
EED-208ENST00000528250 MIER1Q8N108 512 aa13.7□□□□□ -0.22
EED-208ENST00000528250 KLHL34Q8N239 644 aa13.7□□□□□ -0.22
EED-208ENST00000528250 SPOCK2Q92563 424 aa13.66□□□□□ -0.22
EED-208ENST00000528250 SPDYE1Q8NFV5 336 aaPredicted RBP13.63□□□□□ -0.23
EED-208ENST00000528250 PKD2Q13563 968 aa13.62□□□□□ -0.23
EED-208ENST00000528250 REM2Q8IYK8 340 aaPredicted RBP13.62□□□□□ -0.23
EED-208ENST00000528250 CLEC11AQ9Y240 323 aa13.55□□□□□ -0.24
EED-208ENST00000528250 PLEKHG5O94827 1062 aa13.54□□□□□ -0.24
EED-208ENST00000528250 SLC24A1O60721 1099 aa13.5□□□□□ -0.25
EED-208ENST00000528250 ZBTB47Q9UFB7 747 aaPredicted RBP13.49□□□□□ -0.25
EED-208ENST00000528250 PRR29P0C7W0 189 aa13.48□□□□□ -0.25
EED-208ENST00000528250 PITPNM1O00562 1244 aa13.46□□□□□ -0.25
EED-208ENST00000528250 CREBZFQ9NS37 354 aa13.45□□□□□ -0.26
EED-208ENST00000528250 ECM2O94769 699 aaPredicted RBP13.42□□□□□ -0.26
EED-208ENST00000528250 DCAF8L2P0C7V8 631 aa13.39□□□□□ -0.27
EED-208ENST00000528250 CHRDL2Q6WN34 429 aa13.38□□□□□ -0.27
EED-208ENST00000528250 MNX1P50219 401 aaPredicted RBP13.37□□□□□ -0.27
EED-208ENST00000528250 CIZ1Q9ULV3 898 aaPredicted RBP13.37□□□□□ -0.27
EED-208ENST00000528250 NUBP1P53384 320 aa13.36□□□□□ -0.27
EED-208ENST00000528250 RGL2O15211 777 aa13.32□□□□□ -0.28
EED-208ENST00000528250 GSE1Q14687 1217 aa13.24□□□□□ -0.29
EED-208ENST00000528250 DCAF8Q5TAQ9 597 aa13.22□□□□□ -0.29
EED-208ENST00000528250 CHADLQ6NUI6 762 aa13.22□□□□□ -0.29
EED-208ENST00000528250 TRIM41Q8WV44 630 aa13.22□□□□□ -0.29
EED-208ENST00000528250 NPM1P06748 294 aaKnown RBP eCLIP13.21□□□□□ -0.29
EED-208ENST00000528250 PLCB2Q00722 1185 aa13.21□□□□□ -0.29
EED-208ENST00000528250 RASEFQ8IZ41 740 aa13.21□□□□□ -0.29
EED-208ENST00000528250 FAM212AQ96EL1 285 aa13.18□□□□□ -0.3
EED-208ENST00000528250 RNF25Q96BH1 459 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms