Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 KRT18P11-201ENST00000435214 1283 ntBASIC19.94■□□□□ 0.78
SLC6A12P48065 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC6A12P48065 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.94■□□□□ 0.78
SLC6A12P48065 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.94■□□□□ 0.78
SLC6A12P48065 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC6A12P48065 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC6A12P48065 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SLC6A12P48065 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC6A12P48065 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC6A12P48065 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.94■□□□□ 0.78
SLC6A12P48065 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SLC6A12P48065 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.94■□□□□ 0.78
SLC6A12P48065 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.94■□□□□ 0.78
SLC6A12P48065 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC6A12P48065 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC6A12P48065 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SLC6A12P48065 MIR935-201ENST00000401179 91 ntBASIC19.93■□□□□ 0.78
SLC6A12P48065 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
SLC6A12P48065 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SLC6A12P48065 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SLC6A12P48065 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.93■□□□□ 0.78
SLC6A12P48065 AL162430.1-201ENST00000480705 870 ntBASIC19.93■□□□□ 0.78
SLC6A12P48065 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SLC6A12P48065 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.93■□□□□ 0.78
SLC6A12P48065 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.93■□□□□ 0.78
SLC6A12P48065 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.93■□□□□ 0.78
SLC6A12P48065 AC137761.2-201ENST00000561729 223 ntBASIC19.93■□□□□ 0.78
SLC6A12P48065 AC145350.3-201ENST00000569033 163 ntBASIC19.93■□□□□ 0.78
SLC6A12P48065 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SLC6A12P48065 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
SLC6A12P48065 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.93■□□□□ 0.78
SLC6A12P48065 AC010536.3-201ENST00000620306 533 ntBASIC19.93■□□□□ 0.78
SLC6A12P48065 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.93■□□□□ 0.78
SLC6A12P48065 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SLC6A12P48065 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SLC6A12P48065 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC6A12P48065 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SLC6A12P48065 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC6A12P48065 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC6A12P48065 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SLC6A12P48065 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC6A12P48065 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.92■□□□□ 0.78
SLC6A12P48065 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.92■□□□□ 0.78
SLC6A12P48065 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.92■□□□□ 0.78
SLC6A12P48065 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC6A12P48065 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC6A12P48065 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SLC6A12P48065 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC6A12P48065 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
SLC6A12P48065 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.92■□□□□ 0.78
SLC6A12P48065 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.92■□□□□ 0.78
SLC6A12P48065 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.92■□□□□ 0.78
SLC6A12P48065 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC6A12P48065 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.92■□□□□ 0.78
SLC6A12P48065 AC007322.3-201ENST00000426526 701 ntBASIC19.92■□□□□ 0.78
SLC6A12P48065 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SLC6A12P48065 TERF1P5-201ENST00000477545 1207 ntBASIC19.92■□□□□ 0.78
SLC6A12P48065 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
SLC6A12P48065 MIR5787-201ENST00000611784 55 ntBASIC19.92■□□□□ 0.78
SLC6A12P48065 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC6A12P48065 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SLC6A12P48065 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SLC6A12P48065 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.92■□□□□ 0.78
SLC6A12P48065 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC6A12P48065 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SLC6A12P48065 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SLC6A12P48065 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC6A12P48065 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC6A12P48065 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC6A12P48065 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.91■□□□□ 0.78
SLC6A12P48065 AC006015.1-201ENST00000429970 570 ntBASIC19.91■□□□□ 0.78
SLC6A12P48065 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.91■□□□□ 0.78
SLC6A12P48065 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SLC6A12P48065 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SLC6A12P48065 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.91■□□□□ 0.78
SLC6A12P48065 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.91■□□□□ 0.78
SLC6A12P48065 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SLC6A12P48065 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC6A12P48065 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC6A12P48065 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC6A12P48065 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC6A12P48065 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC6A12P48065 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.9■□□□□ 0.78
SLC6A12P48065 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC6A12P48065 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SLC6A12P48065 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC6A12P48065 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.9■□□□□ 0.78
SLC6A12P48065 AL121603.2-201ENST00000557373 2117 ntBASIC19.9■□□□□ 0.78
SLC6A12P48065 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.9■□□□□ 0.78
SLC6A12P48065 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC6A12P48065 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC6A12P48065 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SLC6A12P48065 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
SLC6A12P48065 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.9■□□□□ 0.78
SLC6A12P48065 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC6A12P48065 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC6A12P48065 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SLC6A12P48065 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SLC6A12P48065 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SLC6A12P48065 MFSD11-216ENST00000590393 1141 ntBASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms