Protein–RNA interactions for Protein: P43004

SLC1A2, Excitatory amino acid transporter 2, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A2P43004 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.56■□□□□ 0.88
SLC1A2P43004 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.56■□□□□ 0.88
SLC1A2P43004 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.56■□□□□ 0.88
SLC1A2P43004 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.56■□□□□ 0.88
SLC1A2P43004 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.56■□□□□ 0.88
SLC1A2P43004 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC1A2P43004 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC1A2P43004 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SLC1A2P43004 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.56■□□□□ 0.88
SLC1A2P43004 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC1A2P43004 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.56■□□□□ 0.88
SLC1A2P43004 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC1A2P43004 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.55■□□□□ 0.88
SLC1A2P43004 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC1A2P43004 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC1A2P43004 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLC1A2P43004 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.55■□□□□ 0.88
SLC1A2P43004 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC1A2P43004 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC1A2P43004 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.55■□□□□ 0.88
SLC1A2P43004 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLC1A2P43004 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.55■□□□□ 0.88
SLC1A2P43004 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC1A2P43004 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.55■□□□□ 0.88
SLC1A2P43004 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC1A2P43004 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC1A2P43004 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.55■□□□□ 0.88
SLC1A2P43004 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC1A2P43004 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
SLC1A2P43004 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC1A2P43004 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.54■□□□□ 0.88
SLC1A2P43004 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC1A2P43004 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC1A2P43004 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.54■□□□□ 0.88
SLC1A2P43004 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC1A2P43004 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.54■□□□□ 0.88
SLC1A2P43004 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SLC1A2P43004 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC1A2P43004 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
SLC1A2P43004 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.54■□□□□ 0.88
SLC1A2P43004 KRT18P20-201ENST00000548986 1279 ntBASIC20.54■□□□□ 0.88
SLC1A2P43004 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.54■□□□□ 0.88
SLC1A2P43004 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC1A2P43004 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC1A2P43004 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC1A2P43004 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
SLC1A2P43004 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC1A2P43004 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.54■□□□□ 0.88
SLC1A2P43004 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC1A2P43004 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC1A2P43004 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SLC1A2P43004 AC020907.5-201ENST00000624372 1936 ntBASIC20.53■□□□□ 0.88
SLC1A2P43004 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
SLC1A2P43004 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.53■□□□□ 0.88
SLC1A2P43004 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.53■□□□□ 0.88
SLC1A2P43004 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.53■□□□□ 0.88
SLC1A2P43004 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC1A2P43004 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC1A2P43004 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.53■□□□□ 0.88
SLC1A2P43004 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.53■□□□□ 0.88
SLC1A2P43004 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC1A2P43004 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.53■□□□□ 0.88
SLC1A2P43004 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLC1A2P43004 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.53■□□□□ 0.88
SLC1A2P43004 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC1A2P43004 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SLC1A2P43004 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SLC1A2P43004 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC1A2P43004 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC1A2P43004 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.52■□□□□ 0.88
SLC1A2P43004 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.52■□□□□ 0.88
SLC1A2P43004 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC1A2P43004 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC1A2P43004 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC1A2P43004 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
SLC1A2P43004 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC1A2P43004 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SLC1A2P43004 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.52■□□□□ 0.88
SLC1A2P43004 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC1A2P43004 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.52■□□□□ 0.88
SLC1A2P43004 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.52■□□□□ 0.88
SLC1A2P43004 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.52■□□□□ 0.88
SLC1A2P43004 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SLC1A2P43004 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.52■□□□□ 0.88
SLC1A2P43004 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.52■□□□□ 0.88
SLC1A2P43004 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC1A2P43004 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SLC1A2P43004 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC1A2P43004 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.52■□□□□ 0.87
SLC1A2P43004 AL121603.2-201ENST00000557373 2117 ntBASIC20.51■□□□□ 0.87
SLC1A2P43004 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SLC1A2P43004 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.51■□□□□ 0.87
SLC1A2P43004 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.51■□□□□ 0.87
SLC1A2P43004 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SLC1A2P43004 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC1A2P43004 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC1A2P43004 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC1A2P43004 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.51■□□□□ 0.87
SLC1A2P43004 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.51■□□□□ 0.87
SLC1A2P43004 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms