Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC31.22■■■□□ 2.59
KDM5CP41229 AP001412.1-201ENST00000608405 714 ntBASIC31.22■■■□□ 2.59
KDM5CP41229 AL353708.3-201ENST00000610272 989 ntBASIC31.22■■■□□ 2.59
KDM5CP41229 AC110285.5-201ENST00000611501 352 ntBASIC31.22■■■□□ 2.59
KDM5CP41229 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC31.21■■■□□ 2.59
KDM5CP41229 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
KDM5CP41229 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC31.21■■■□□ 2.59
KDM5CP41229 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
KDM5CP41229 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC31.21■■■□□ 2.59
KDM5CP41229 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
KDM5CP41229 SERP1-205ENST00000487153 657 ntTSL 4 BASIC31.21■■■□□ 2.59
KDM5CP41229 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC31.21■■■□□ 2.59
KDM5CP41229 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC31.21■■■□□ 2.59
KDM5CP41229 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC31.21■■■□□ 2.59
KDM5CP41229 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC31.2■■■□□ 2.59
KDM5CP41229 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
KDM5CP41229 AC026471.6-201ENST00000622954 1905 ntBASIC31.2■■■□□ 2.59
KDM5CP41229 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
KDM5CP41229 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
KDM5CP41229 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
KDM5CP41229 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC31.2■■■□□ 2.58
KDM5CP41229 GRAP-204ENST00000573099 846 ntTSL 3 BASIC31.2■■■□□ 2.58
KDM5CP41229 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC31.2■■■□□ 2.58
KDM5CP41229 CD177P1-201ENST00000606252 935 ntBASIC31.2■■■□□ 2.58
KDM5CP41229 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC31.2■■■□□ 2.58
KDM5CP41229 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC31.2■■■□□ 2.58
KDM5CP41229 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC31.19■■■□□ 2.58
KDM5CP41229 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC31.19■■■□□ 2.58
KDM5CP41229 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC31.19■■■□□ 2.58
KDM5CP41229 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC31.19■■■□□ 2.58
KDM5CP41229 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC31.19■■■□□ 2.58
KDM5CP41229 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC31.19■■■□□ 2.58
KDM5CP41229 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
KDM5CP41229 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC31.19■■■□□ 2.58
KDM5CP41229 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
KDM5CP41229 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC31.19■■■□□ 2.58
KDM5CP41229 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
KDM5CP41229 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
KDM5CP41229 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
KDM5CP41229 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
KDM5CP41229 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
KDM5CP41229 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
KDM5CP41229 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
KDM5CP41229 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC31.18■■■□□ 2.58
KDM5CP41229 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC31.18■■■□□ 2.58
KDM5CP41229 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC31.18■■■□□ 2.58
KDM5CP41229 AC005829.2-201ENST00000571422 1056 ntBASIC31.18■■■□□ 2.58
KDM5CP41229 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC31.18■■■□□ 2.58
KDM5CP41229 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC31.18■■■□□ 2.58
KDM5CP41229 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
KDM5CP41229 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
KDM5CP41229 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC31.18■■■□□ 2.58
KDM5CP41229 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC31.18■■■□□ 2.58
KDM5CP41229 CASK-201ENST00000378154 2494 ntTSL 5 BASIC31.18■■■□□ 2.58
KDM5CP41229 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
KDM5CP41229 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
KDM5CP41229 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC31.17■■■□□ 2.58
KDM5CP41229 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC31.17■■■□□ 2.58
KDM5CP41229 C2orf69P4-201ENST00000565394 541 ntBASIC31.17■■■□□ 2.58
KDM5CP41229 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC31.17■■■□□ 2.58
KDM5CP41229 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
KDM5CP41229 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC31.17■■■□□ 2.58
KDM5CP41229 NARF-205ENST00000412079 1760 ntTSL 5 BASIC31.17■■■□□ 2.58
KDM5CP41229 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC31.17■■■□□ 2.58
KDM5CP41229 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
KDM5CP41229 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
KDM5CP41229 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC31.17■■■□□ 2.58
KDM5CP41229 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
KDM5CP41229 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC31.17■■■□□ 2.58
KDM5CP41229 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC31.17■■■□□ 2.58
KDM5CP41229 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC31.17■■■□□ 2.58
KDM5CP41229 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
KDM5CP41229 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC31.16■■■□□ 2.58
KDM5CP41229 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
KDM5CP41229 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
KDM5CP41229 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC31.16■■■□□ 2.58
KDM5CP41229 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC31.16■■■□□ 2.58
KDM5CP41229 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC31.16■■■□□ 2.58
KDM5CP41229 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
KDM5CP41229 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
KDM5CP41229 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC31.15■■■□□ 2.58
KDM5CP41229 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
KDM5CP41229 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
KDM5CP41229 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
KDM5CP41229 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC31.15■■■□□ 2.58
KDM5CP41229 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC31.15■■■□□ 2.58
KDM5CP41229 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC31.15■■■□□ 2.58
KDM5CP41229 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC31.15■■■□□ 2.58
KDM5CP41229 PRKY-204ENST00000533551 1019 ntBASIC31.15■■■□□ 2.58
KDM5CP41229 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC31.15■■■□□ 2.58
KDM5CP41229 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
KDM5CP41229 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
KDM5CP41229 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
KDM5CP41229 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC31.14■■■□□ 2.58
KDM5CP41229 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
KDM5CP41229 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC31.14■■■□□ 2.58
KDM5CP41229 STX5-203ENST00000394690 1568 ntTSL 5 BASIC31.14■■■□□ 2.58
KDM5CP41229 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC31.14■■■□□ 2.58
KDM5CP41229 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
KDM5CP41229 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms