Protein–RNA interactions for Protein: P40016

RPN3, 26S proteasome regulatory subunit RPN3, yeastyeast

Known RBP Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN3P40016 STE5YDR103W 2754 nt3.82□□□□□ -1.8
RPN3P40016 RAD4YER162C 2265 nt3.82□□□□□ -1.8
RPN3P40016 YJR030CYJR030C 2238 nt3.82□□□□□ -1.8
RPN3P40016 SSP1YHR184W 1716 nt3.82□□□□□ -1.8
RPN3P40016 JIP5YPR169W 1479 nt3.82□□□□□ -1.8
RPN3P40016 GPI8YDR331W 1236 nt3.82□□□□□ -1.8
RPN3P40016 RFC3YNL290W 1023 nt3.82□□□□□ -1.8
RPN3P40016 YPL142CYPL142C 318 nt3.82□□□□□ -1.8
RPN3P40016 APE2YKL157W 2859 nt3.82□□□□□ -1.8
RPN3P40016 YKL222CYKL222C 2118 nt3.82□□□□□ -1.8
RPN3P40016 ECM22YLR228C 2445 nt3.81□□□□□ -1.8
RPN3P40016 YCR081C-AYCR081C-A 237 nt3.81□□□□□ -1.8
RPN3P40016 YHR214W-AYHR214W-A 486 nt3.81□□□□□ -1.8
RPN3P40016 YLR031WYLR031W 561 nt3.81□□□□□ -1.8
RPN3P40016 YAR068WYAR068W 486 nt3.81□□□□□ -1.8
RPN3P40016 PFY1YOR122C 381 nt3.81□□□□□ -1.8
RPN3P40016 SRB4YER022W 2064 nt3.81□□□□□ -1.8
RPN3P40016 EMP70YLR083C 2004 nt3.81□□□□□ -1.8
RPN3P40016 VIP1YLR410W 3441 nt3.81□□□□□ -1.8
RPN3P40016 BCK2YER167W 2556 nt3.81□□□□□ -1.8
RPN3P40016 RPS26BYER131W 360 nt3.8□□□□□ -1.8
RPN3P40016 YIL012WYIL012W 342 nt3.8□□□□□ -1.8
RPN3P40016 tW(UCA)QtW(UCA)Q 74 nt3.8□□□□□ -1.8
RPN3P40016 PET191YJR034W 327 nt3.8□□□□□ -1.8
RPN3P40016 DGK1YOR311C 873 nt3.8□□□□□ -1.8
RPN3P40016 YPL080CYPL080C 327 nt3.8□□□□□ -1.8
RPN3P40016 TRK1YJL129C 3708 nt3.79□□□□□ -1.8
RPN3P40016 RPL1BYGL135W 654 nt3.79□□□□□ -1.8
RPN3P40016 YJL202CYJL202C 348 nt3.79□□□□□ -1.8
RPN3P40016 IMP4YNL075W 873 nt3.79□□□□□ -1.8
RPN3P40016 YPT53YNL093W 663 nt3.79□□□□□ -1.8
RPN3P40016 TIR2YOR010C 756 nt3.79□□□□□ -1.8
RPN3P40016 RPL1AYPL220W 654 nt3.79□□□□□ -1.8
RPN3P40016 RAD2YGR258C 3096 nt3.79□□□□□ -1.8
RPN3P40016 CBP2YHL038C 1893 nt3.79□□□□□ -1.8
RPN3P40016 HBT1YDL223C 3141 nt3.79□□□□□ -1.8
RPN3P40016 RSC1YGR056W 2787 nt3.79□□□□□ -1.8
RPN3P40016 YDL180WYDL180W 1644 nt3.78□□□□□ -1.8
RPN3P40016 RPL39YJL189W 156 nt3.78□□□□□ -1.8
RPN3P40016 JIP3YLR331C 378 nt3.78□□□□□ -1.8
RPN3P40016 YOP1YPR028W 543 nt3.78□□□□□ -1.8
RPN3P40016 SRO7YPR032W 3102 nt3.78□□□□□ -1.8
RPN3P40016 SPT6YGR116W 4356 nt3.78□□□□□ -1.8
RPN3P40016 ELM1YKL048C 1923 nt3.78□□□□□ -1.81
RPN3P40016 NDT80YHR124W 1884 nt3.77□□□□□ -1.81
RPN3P40016 PIM1YBL022C 3402 nt3.77□□□□□ -1.81
RPN3P40016 RNR1YER070W 2667 nt3.77□□□□□ -1.81
RPN3P40016 SHE2YKL130C 741 nt3.77□□□□□ -1.81
RPN3P40016 YKL156C-AYKL156C-A 117 nt3.77□□□□□ -1.81
RPN3P40016 RPL22AYLR061W 366 nt3.77□□□□□ -1.81
RPN3P40016 SSN8YNL025C 972 nt3.77□□□□□ -1.81
RPN3P40016 NRP1YDL167C 2160 nt3.77□□□□□ -1.81
RPN3P40016 CWH41YGL027C 2502 nt3.77□□□□□ -1.81
RPN3P40016 tM(CAU)Q1tM(CAU)Q1 76 nt3.76□□□□□ -1.81
RPN3P40016 NOP19YGR251W 591 nt3.76□□□□□ -1.81
RPN3P40016 YAL004WYAL004W 648 nt3.76□□□□□ -1.81
RPN3P40016 RPS21BYJL136C 264 nt3.76□□□□□ -1.81
RPN3P40016 ISF1YMR081C 1017 nt3.76□□□□□ -1.81
RPN3P40016 RPS7BYNL096C 573 nt3.76□□□□□ -1.81
RPN3P40016 YLR001CYLR001C 2589 nt3.76□□□□□ -1.81
RPN3P40016 SPC72YAL047C 1869 nt3.75□□□□□ -1.81
RPN3P40016 TAF1YGR274C 3201 nt3.75□□□□□ -1.81
RPN3P40016 ATP17YDR377W 306 nt3.75□□□□□ -1.81
RPN3P40016 RAD6YGL058W 519 nt3.75□□□□□ -1.81
RPN3P40016 PAU23YLR037C 375 nt3.75□□□□□ -1.81
RPN3P40016 MDN1YLR106C 14733 nt3.75□□□□□ -1.81
RPN3P40016 MPS1YDL028C 2295 nt3.74□□□□□ -1.81
RPN3P40016 ALA1YOR335C 2877 nt3.74□□□□□ -1.81
RPN3P40016 FUN12YAL035W 3009 nt3.74□□□□□ -1.81
RPN3P40016 YKL100CYKL100C 1764 nt3.74□□□□□ -1.81
RPN3P40016 FRE8YLR047C 2061 nt3.74□□□□□ -1.81
RPN3P40016 YER076W-AYER076W-A 348 nt3.74□□□□□ -1.81
RPN3P40016 CAF130YGR134W 3369 nt3.74□□□□□ -1.81
RPN3P40016 MSL1YIR009W 336 nt3.74□□□□□ -1.81
RPN3P40016 YIR040CYIR040C 333 nt3.74□□□□□ -1.81
RPN3P40016 YKL050CYKL050C 2769 nt3.74□□□□□ -1.81
RPN3P40016 SLM6YBR266C 453 nt3.74□□□□□ -1.81
RPN3P40016 KIN82YCR091W 2163 nt3.73□□□□□ -1.81
RPN3P40016 ALY1YKR021W 2748 nt3.73□□□□□ -1.81
RPN3P40016 AKR1YDR264C 2295 nt3.73□□□□□ -1.81
RPN3P40016 CPA2YJR109C 3357 nt3.73□□□□□ -1.81
RPN3P40016 ERG28YER044C 447 nt3.73□□□□□ -1.81
RPN3P40016 RPL29YFR032C-A 180 nt3.73□□□□□ -1.81
RPN3P40016 YHR007C-AYHR007C-A 216 nt3.73□□□□□ -1.81
RPN3P40016 RPC10YHR143W-A 213 nt3.73□□□□□ -1.81
RPN3P40016 RPL15AYLR029C 615 nt3.73□□□□□ -1.81
RPN3P40016 TVP18YMR071C 504 nt3.73□□□□□ -1.81
RPN3P40016 RPS8AYBL072C 603 nt3.73□□□□□ -1.81
RPN3P40016 YPR003CYPR003C 2265 nt3.72□□□□□ -1.81
RPN3P40016 SMI1YGR229C 1518 nt3.72□□□□□ -1.81
RPN3P40016 SHQ1YIL104C 1524 nt3.72□□□□□ -1.81
RPN3P40016 YEL018C-AYEL018C-A 534 nt3.72□□□□□ -1.81
RPN3P40016 CAJ1YER048C 1176 nt3.72□□□□□ -1.81
RPN3P40016 KIP3YGL216W 2418 nt3.72□□□□□ -1.81
RPN3P40016 NDD1YOR372C 1665 nt3.71□□□□□ -1.81
RPN3P40016 GPI10YGL142C 1851 nt3.71□□□□□ -1.82
RPN3P40016 VID27YNL212W 2349 nt3.71□□□□□ -1.82
RPN3P40016 YDR089WYDR089W 2610 nt3.71□□□□□ -1.82
RPN3P40016 RPL37AYLR185W 267 nt3.71□□□□□ -1.82
RPN3P40016 YLR294CYLR294C 330 nt3.71□□□□□ -1.82
Retrieved 100 of 7,029 protein–RNA pairs in 42.5 ms