Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
KRT20P35900 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.52■□□□□ 0.71
KRT20P35900 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
KRT20P35900 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRT20P35900 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.51■□□□□ 0.71
KRT20P35900 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRT20P35900 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRT20P35900 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRT20P35900 AC026271.2-201ENST00000428091 497 ntBASIC19.51■□□□□ 0.71
KRT20P35900 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.51■□□□□ 0.71
KRT20P35900 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.51■□□□□ 0.71
KRT20P35900 DUX4L2-201ENST00000561772 1275 ntBASIC19.51■□□□□ 0.71
KRT20P35900 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.51■□□□□ 0.71
KRT20P35900 AC053503.5-201ENST00000601508 636 ntBASIC19.51■□□□□ 0.71
KRT20P35900 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.51■□□□□ 0.71
KRT20P35900 DUX4L6-201ENST00000626483 1275 ntBASIC19.51■□□□□ 0.71
KRT20P35900 DUX4L1-201ENST00000627662 1275 ntBASIC19.51■□□□□ 0.71
KRT20P35900 DUX4L8-201ENST00000629013 1275 ntBASIC19.51■□□□□ 0.71
KRT20P35900 DUX4L3-201ENST00000630187 1275 ntBASIC19.51■□□□□ 0.71
KRT20P35900 DUX4L7-201ENST00000630678 1275 ntBASIC19.51■□□□□ 0.71
KRT20P35900 DUX4L5-201ENST00000630834 1275 ntBASIC19.51■□□□□ 0.71
KRT20P35900 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRT20P35900 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
KRT20P35900 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
KRT20P35900 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.51■□□□□ 0.71
KRT20P35900 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRT20P35900 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRT20P35900 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
KRT20P35900 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
KRT20P35900 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KRT20P35900 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
KRT20P35900 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
KRT20P35900 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KRT20P35900 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.5■□□□□ 0.71
KRT20P35900 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
KRT20P35900 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
KRT20P35900 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.5■□□□□ 0.71
KRT20P35900 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
KRT20P35900 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.5■□□□□ 0.71
KRT20P35900 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.5■□□□□ 0.71
KRT20P35900 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.5■□□□□ 0.71
KRT20P35900 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.5■□□□□ 0.71
KRT20P35900 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.5■□□□□ 0.71
KRT20P35900 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
KRT20P35900 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
KRT20P35900 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
KRT20P35900 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KRT20P35900 FEM1AP1-201ENST00000431297 1995 ntBASIC19.5■□□□□ 0.71
KRT20P35900 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KRT20P35900 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KRT20P35900 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
KRT20P35900 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.49■□□□□ 0.71
KRT20P35900 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
KRT20P35900 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KRT20P35900 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KRT20P35900 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KRT20P35900 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KRT20P35900 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KRT20P35900 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KRT20P35900 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.49■□□□□ 0.71
KRT20P35900 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.49■□□□□ 0.71
KRT20P35900 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
KRT20P35900 KRT19P1-201ENST00000405746 1186 ntBASIC19.49■□□□□ 0.71
KRT20P35900 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.49■□□□□ 0.71
KRT20P35900 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
KRT20P35900 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KRT20P35900 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.49■□□□□ 0.71
KRT20P35900 EEF1DP3-203ENST00000566025 782 ntBASIC19.49■□□□□ 0.71
KRT20P35900 NTF6G-201ENST00000591094 616 ntBASIC19.49■□□□□ 0.71
KRT20P35900 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
KRT20P35900 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.49■□□□□ 0.71
KRT20P35900 AC008175.2-201ENST00000612840 297 ntBASIC19.49■□□□□ 0.71
KRT20P35900 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
KRT20P35900 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KRT20P35900 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.49■□□□□ 0.71
KRT20P35900 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.49■□□□□ 0.71
KRT20P35900 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KRT20P35900 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
KRT20P35900 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KRT20P35900 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KRT20P35900 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.48■□□□□ 0.71
KRT20P35900 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.48■□□□□ 0.71
KRT20P35900 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
KRT20P35900 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
KRT20P35900 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.48■□□□□ 0.71
KRT20P35900 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.48■□□□□ 0.71
KRT20P35900 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
KRT20P35900 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KRT20P35900 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KRT20P35900 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
KRT20P35900 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT20P35900 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT20P35900 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
KRT20P35900 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
KRT20P35900 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT20P35900 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
KRT20P35900 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT20P35900 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT20P35900 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
KRT20P35900 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms