Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.45■□□□□ 0.54
SOX6P35712 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SOX6P35712 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SOX6P35712 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SOX6P35712 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SOX6P35712 AC121338.2-201ENST00000622535 1744 ntBASIC18.45■□□□□ 0.54
SOX6P35712 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SOX6P35712 AL512408.1-201ENST00000569378 2000 ntBASIC18.45■□□□□ 0.54
SOX6P35712 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SOX6P35712 AC099778.1-201ENST00000568593 1911 ntBASIC18.45■□□□□ 0.54
SOX6P35712 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
SOX6P35712 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SOX6P35712 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.45■□□□□ 0.54
SOX6P35712 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
SOX6P35712 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SOX6P35712 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
SOX6P35712 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.44■□□□□ 0.54
SOX6P35712 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
SOX6P35712 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SOX6P35712 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SOX6P35712 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
SOX6P35712 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.44■□□□□ 0.54
SOX6P35712 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SOX6P35712 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SOX6P35712 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.44■□□□□ 0.54
SOX6P35712 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SOX6P35712 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SOX6P35712 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.44■□□□□ 0.54
SOX6P35712 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.44■□□□□ 0.54
SOX6P35712 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SOX6P35712 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
SOX6P35712 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SOX6P35712 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SOX6P35712 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SOX6P35712 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SOX6P35712 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SOX6P35712 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SOX6P35712 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
SOX6P35712 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SOX6P35712 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
SOX6P35712 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SOX6P35712 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.43■□□□□ 0.54
SOX6P35712 BX664725.1-201ENST00000438252 379 ntBASIC18.43■□□□□ 0.54
SOX6P35712 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.43■□□□□ 0.54
SOX6P35712 AL451085.2-201ENST00000605085 799 ntBASIC18.43■□□□□ 0.54
SOX6P35712 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SOX6P35712 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SOX6P35712 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.43■□□□□ 0.54
SOX6P35712 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.43■□□□□ 0.54
SOX6P35712 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SOX6P35712 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.43■□□□□ 0.54
SOX6P35712 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
SOX6P35712 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.43■□□□□ 0.54
SOX6P35712 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.43■□□□□ 0.54
SOX6P35712 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.43■□□□□ 0.54
SOX6P35712 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SOX6P35712 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SOX6P35712 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
SOX6P35712 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SOX6P35712 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SOX6P35712 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
SOX6P35712 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.42■□□□□ 0.54
SOX6P35712 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SOX6P35712 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SOX6P35712 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SOX6P35712 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SOX6P35712 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SOX6P35712 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SOX6P35712 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.42■□□□□ 0.54
SOX6P35712 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
SOX6P35712 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SOX6P35712 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.42■□□□□ 0.54
SOX6P35712 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
SOX6P35712 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.42■□□□□ 0.54
SOX6P35712 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SOX6P35712 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SOX6P35712 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SOX6P35712 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.42■□□□□ 0.54
SOX6P35712 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
SOX6P35712 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SOX6P35712 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SOX6P35712 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.42■□□□□ 0.54
SOX6P35712 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SOX6P35712 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SOX6P35712 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
SOX6P35712 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.42■□□□□ 0.54
SOX6P35712 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SOX6P35712 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SOX6P35712 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.41■□□□□ 0.54
SOX6P35712 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SOX6P35712 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SOX6P35712 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SOX6P35712 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SOX6P35712 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SOX6P35712 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SOX6P35712 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.41■□□□□ 0.54
SOX6P35712 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.41■□□□□ 0.54
SOX6P35712 AC009299.2-201ENST00000482477 511 ntBASIC18.41■□□□□ 0.54
SOX6P35712 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.41■□□□□ 0.54
SOX6P35712 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms