Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
RFC4P35249 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
RFC4P35249 KRASP1-201ENST00000407852 552 ntBASIC26.13■■□□□ 1.77
RFC4P35249 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
RFC4P35249 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC26.13■■□□□ 1.77
RFC4P35249 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
RFC4P35249 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
RFC4P35249 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
RFC4P35249 AC006557.6-201ENST00000623071 864 ntBASIC26.13■■□□□ 1.77
RFC4P35249 AC113410.3-201ENST00000623366 203 ntBASIC26.13■■□□□ 1.77
RFC4P35249 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
RFC4P35249 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
RFC4P35249 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC26.13■■□□□ 1.77
RFC4P35249 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
RFC4P35249 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
RFC4P35249 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
RFC4P35249 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RFC4P35249 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
RFC4P35249 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
RFC4P35249 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
RFC4P35249 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC26.12■■□□□ 1.77
RFC4P35249 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC26.12■■□□□ 1.77
RFC4P35249 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC26.12■■□□□ 1.77
RFC4P35249 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC26.12■■□□□ 1.77
RFC4P35249 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
RFC4P35249 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC26.12■■□□□ 1.77
RFC4P35249 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC26.12■■□□□ 1.77
RFC4P35249 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC26.11■■□□□ 1.77
RFC4P35249 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
RFC4P35249 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
RFC4P35249 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
RFC4P35249 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
RFC4P35249 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC26.11■■□□□ 1.77
RFC4P35249 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
RFC4P35249 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC26.11■■□□□ 1.77
RFC4P35249 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC26.11■■□□□ 1.77
RFC4P35249 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC26.11■■□□□ 1.77
RFC4P35249 AC005829.2-201ENST00000571422 1056 ntBASIC26.11■■□□□ 1.77
RFC4P35249 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
RFC4P35249 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
RFC4P35249 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
RFC4P35249 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC26.11■■□□□ 1.77
RFC4P35249 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC26.11■■□□□ 1.77
RFC4P35249 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
RFC4P35249 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RFC4P35249 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC26.1■■□□□ 1.77
RFC4P35249 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RFC4P35249 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC26.1■■□□□ 1.77
RFC4P35249 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
RFC4P35249 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RFC4P35249 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC26.1■■□□□ 1.77
RFC4P35249 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RFC4P35249 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RFC4P35249 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC26.1■■□□□ 1.77
RFC4P35249 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC26.1■■□□□ 1.77
RFC4P35249 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC26.1■■□□□ 1.77
RFC4P35249 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC26.1■■□□□ 1.77
RFC4P35249 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC26.1■■□□□ 1.77
RFC4P35249 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
RFC4P35249 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RFC4P35249 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
RFC4P35249 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC26.1■■□□□ 1.77
RFC4P35249 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RFC4P35249 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
RFC4P35249 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
RFC4P35249 AC080038.3-201ENST00000623346 1952 ntBASIC26.09■■□□□ 1.77
RFC4P35249 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
RFC4P35249 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RFC4P35249 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
RFC4P35249 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
RFC4P35249 SERP1-205ENST00000487153 657 ntTSL 4 BASIC26.09■■□□□ 1.77
RFC4P35249 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC26.09■■□□□ 1.77
RFC4P35249 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC26.09■■□□□ 1.77
RFC4P35249 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC26.09■■□□□ 1.77
RFC4P35249 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC26.09■■□□□ 1.77
RFC4P35249 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC26.09■■□□□ 1.77
RFC4P35249 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
RFC4P35249 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC26.08■■□□□ 1.77
RFC4P35249 AC087633.2-202ENST00000565166 1439 ntBASIC26.08■■□□□ 1.77
RFC4P35249 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC26.08■■□□□ 1.77
RFC4P35249 PRKY-204ENST00000533551 1019 ntBASIC26.08■■□□□ 1.77
RFC4P35249 AL355075.4-201ENST00000554988 638 ntBASIC26.08■■□□□ 1.77
RFC4P35249 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC26.08■■□□□ 1.77
RFC4P35249 TK2-213ENST00000563369 882 ntTSL 5 BASIC26.08■■□□□ 1.77
RFC4P35249 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
RFC4P35249 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC26.08■■□□□ 1.77
RFC4P35249 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC26.08■■□□□ 1.77
RFC4P35249 BRWD1-AS2-201ENST00000603064 1028 ntBASIC26.08■■□□□ 1.77
RFC4P35249 AC097493.4-201ENST00000641197 219 ntBASIC26.08■■□□□ 1.77
RFC4P35249 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
RFC4P35249 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
RFC4P35249 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
RFC4P35249 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC26.08■■□□□ 1.76
RFC4P35249 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC26.08■■□□□ 1.76
RFC4P35249 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC26.08■■□□□ 1.76
RFC4P35249 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.76
RFC4P35249 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.76
RFC4P35249 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RFC4P35249 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
RFC4P35249 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms