Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
SLC6A4P31645 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.24■□□□□ 0.99
SLC6A4P31645 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.24■□□□□ 0.99
SLC6A4P31645 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.24■□□□□ 0.99
SLC6A4P31645 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC6A4P31645 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC6A4P31645 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.24■□□□□ 0.99
SLC6A4P31645 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC6A4P31645 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.24■□□□□ 0.99
SLC6A4P31645 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.24■□□□□ 0.99
SLC6A4P31645 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.24■□□□□ 0.99
SLC6A4P31645 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
SLC6A4P31645 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
SLC6A4P31645 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.24■□□□□ 0.99
SLC6A4P31645 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
SLC6A4P31645 CYP21A1P-202ENST00000354927 1481 ntBASIC21.24■□□□□ 0.99
SLC6A4P31645 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
SLC6A4P31645 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.24■□□□□ 0.99
SLC6A4P31645 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SLC6A4P31645 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SLC6A4P31645 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC6A4P31645 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.23■□□□□ 0.99
SLC6A4P31645 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC6A4P31645 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
SLC6A4P31645 MCRIP2P1-201ENST00000394346 511 ntBASIC21.23■□□□□ 0.99
SLC6A4P31645 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC6A4P31645 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC6A4P31645 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SLC6A4P31645 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.23■□□□□ 0.99
SLC6A4P31645 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.23■□□□□ 0.99
SLC6A4P31645 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.23■□□□□ 0.99
SLC6A4P31645 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.23■□□□□ 0.99
SLC6A4P31645 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC6A4P31645 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.23■□□□□ 0.99
SLC6A4P31645 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SLC6A4P31645 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SLC6A4P31645 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC6A4P31645 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.22■□□□□ 0.99
SLC6A4P31645 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SLC6A4P31645 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC6A4P31645 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC6A4P31645 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SLC6A4P31645 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC6A4P31645 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SLC6A4P31645 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.22■□□□□ 0.99
SLC6A4P31645 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC6A4P31645 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SLC6A4P31645 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
SLC6A4P31645 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC6A4P31645 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SLC6A4P31645 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SLC6A4P31645 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC6A4P31645 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.21■□□□□ 0.99
SLC6A4P31645 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.21■□□□□ 0.99
SLC6A4P31645 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
SLC6A4P31645 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC6A4P31645 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC6A4P31645 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC6A4P31645 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC6A4P31645 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.21■□□□□ 0.99
SLC6A4P31645 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.21■□□□□ 0.99
SLC6A4P31645 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.21■□□□□ 0.99
SLC6A4P31645 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.21■□□□□ 0.99
SLC6A4P31645 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.21■□□□□ 0.99
SLC6A4P31645 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.21■□□□□ 0.99
SLC6A4P31645 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SLC6A4P31645 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.21■□□□□ 0.99
SLC6A4P31645 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.21■□□□□ 0.99
SLC6A4P31645 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SLC6A4P31645 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC6A4P31645 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC6A4P31645 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.2■□□□□ 0.98
SLC6A4P31645 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC6A4P31645 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC6A4P31645 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC6A4P31645 AC011484.1-201ENST00000377652 1995 ntBASIC21.2■□□□□ 0.98
SLC6A4P31645 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC6A4P31645 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC6A4P31645 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SLC6A4P31645 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC6A4P31645 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
SLC6A4P31645 DUSP5P2-201ENST00000426873 1033 ntBASIC21.2■□□□□ 0.98
SLC6A4P31645 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.2■□□□□ 0.98
SLC6A4P31645 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.2■□□□□ 0.98
SLC6A4P31645 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
SLC6A4P31645 MYC-209ENST00000641252 345 ntBASIC21.2■□□□□ 0.98
SLC6A4P31645 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC6A4P31645 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC6A4P31645 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
SLC6A4P31645 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC6A4P31645 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC6A4P31645 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC6A4P31645 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC6A4P31645 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC6A4P31645 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SLC6A4P31645 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC6A4P31645 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
SLC6A4P31645 LSM12P1-201ENST00000411836 588 ntBASIC21.19■□□□□ 0.98
SLC6A4P31645 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SLC6A4P31645 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms