Protein–RNA interactions for Protein: P31385

DEP1, Transcriptional regulatory protein DEP1, yeastyeast

Predictions only

Length 405 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DEP1P31385 PAU23YLR037C 375 nt2.45□□□□□ -2.02
DEP1P31385 ATG38YLR211C 681 nt2.45□□□□□ -2.02
DEP1P31385 CDC123YLR215C 1083 nt2.45□□□□□ -2.02
DEP1P31385 SEC66YBR171W 621 nt2.45□□□□□ -2.02
DEP1P31385 PTP3YER075C 2787 nt2.45□□□□□ -2.02
DEP1P31385 YDR261W-BYDR261W-B 5313 nt2.45□□□□□ -2.02
DEP1P31385 YFL002W-AYFL002W-A 5313 nt2.45□□□□□ -2.02
DEP1P31385 YGR161W-BYGR161W-B 5313 nt2.45□□□□□ -2.02
DEP1P31385 YCL019WYCL019W 5313 nt2.45□□□□□ -2.02
DEP1P31385 SGS1YMR190C 4344 nt2.44□□□□□ -2.02
DEP1P31385 tC(GCA)BtC(GCA)B 72 nt2.44□□□□□ -2.02
DEP1P31385 tC(GCA)GtC(GCA)G 72 nt2.44□□□□□ -2.02
DEP1P31385 tC(GCA)P1tC(GCA)P1 72 nt2.44□□□□□ -2.02
DEP1P31385 tC(GCA)P2tC(GCA)P2 72 nt2.44□□□□□ -2.02
DEP1P31385 TMA20YER007C-A 546 nt2.44□□□□□ -2.02
DEP1P31385 YER091C-AYER091C-A 222 nt2.44□□□□□ -2.02
DEP1P31385 YIL156W-BYIL156W-B 222 nt2.44□□□□□ -2.02
DEP1P31385 YIR020C-BYIR020C-B 735 nt2.44□□□□□ -2.02
DEP1P31385 YAL031W-AYAL031W-A 309 nt2.44□□□□□ -2.02
DEP1P31385 ECM9YKR004C 1134 nt2.44□□□□□ -2.02
DEP1P31385 RRD2YPL152W 1077 nt2.44□□□□□ -2.02
DEP1P31385 ASI3YNL008C 2031 nt2.44□□□□□ -2.02
DEP1P31385 DBF20YPR111W 1695 nt2.44□□□□□ -2.02
DEP1P31385 PDR11YIL013C 4236 nt2.44□□□□□ -2.02
DEP1P31385 MGM1YOR211C 2646 nt2.43□□□□□ -2.02
DEP1P31385 15S_rRNA15S_rRNA 1649 nt2.43□□□□□ -2.02
DEP1P31385 URB2YJR041C 3525 nt2.43□□□□□ -2.02
DEP1P31385 YDR029WYDR029W 315 nt2.43□□□□□ -2.02
DEP1P31385 TIM9YEL020W-A 264 nt2.43□□□□□ -2.02
DEP1P31385 TCD1YHR003C 1290 nt2.43□□□□□ -2.02
DEP1P31385 CAT5YOR125C 702 nt2.43□□□□□ -2.02
DEP1P31385 MRPL40YPL173W 894 nt2.43□□□□□ -2.02
DEP1P31385 STI1YOR027W 1770 nt2.43□□□□□ -2.02
DEP1P31385 YBT1YLL048C 4986 nt2.42□□□□□ -2.02
DEP1P31385 HOP1YIL072W 1818 nt2.42□□□□□ -2.02
DEP1P31385 BOI1YBL085W 2943 nt2.42□□□□□ -2.02
DEP1P31385 DAD1YDR016C 285 nt2.42□□□□□ -2.02
DEP1P31385 YDR018CYDR018C 1191 nt2.42□□□□□ -2.02
DEP1P31385 YDR115WYDR115W 318 nt2.42□□□□□ -2.02
DEP1P31385 MIC19YFR011C 513 nt2.42□□□□□ -2.02
DEP1P31385 CKA1YIL035C 1119 nt2.42□□□□□ -2.02
DEP1P31385 AYR1YIL124W 894 nt2.42□□□□□ -2.02
DEP1P31385 SFT1YKL006C-A 294 nt2.42□□□□□ -2.02
DEP1P31385 COA4YLR218C 453 nt2.42□□□□□ -2.02
DEP1P31385 CWC24YLR323C 780 nt2.42□□□□□ -2.02
DEP1P31385 PAI3YMR174C 207 nt2.42□□□□□ -2.02
DEP1P31385 GIM3YNL153C 390 nt2.42□□□□□ -2.02
DEP1P31385 YOL029CYOL029C 606 nt2.42□□□□□ -2.02
DEP1P31385 YOR050CYOR050C 348 nt2.42□□□□□ -2.02
DEP1P31385 LOA1YPR139C 903 nt2.42□□□□□ -2.02
DEP1P31385 SCD5YOR329C 2619 nt2.42□□□□□ -2.02
DEP1P31385 YIL080WYIL080W 4722 nt2.42□□□□□ -2.02
DEP1P31385 SSD1YDR293C 3753 nt2.41□□□□□ -2.02
DEP1P31385 ATP22YDR350C 2055 nt2.41□□□□□ -2.02
DEP1P31385 NEL1YHR035W 1893 nt2.41□□□□□ -2.02
DEP1P31385 PHO91YNR013C 2685 nt2.41□□□□□ -2.02
DEP1P31385 AFI1YOR129C 2682 nt2.41□□□□□ -2.02
DEP1P31385 MFB1YDR219C 1398 nt2.41□□□□□ -2.02
DEP1P31385 SCH9YHR205W 2475 nt2.41□□□□□ -2.02
DEP1P31385 OCA6YDR067C 675 nt2.41□□□□□ -2.02
DEP1P31385 NCB2YDR397C 441 nt2.41□□□□□ -2.02
DEP1P31385 SDL1YIL167W 633 nt2.41□□□□□ -2.02
DEP1P31385 GPI14YJR013W 1212 nt2.41□□□□□ -2.02
DEP1P31385 DUG2YBR281C 2637 nt2.41□□□□□ -2.02
DEP1P31385 MAL33YBR297W 1407 nt2.41□□□□□ -2.02
DEP1P31385 YDR210W-AYDR210W-A 1317 nt2.41□□□□□ -2.02
DEP1P31385 YNL193WYNL193W 1677 nt2.41□□□□□ -2.02
DEP1P31385 NCS2YNL119W 1482 nt2.4□□□□□ -2.02
DEP1P31385 YCR090CYCR090C 549 nt2.4□□□□□ -2.03
DEP1P31385 YDR461C-AYDR461C-A 243 nt2.4□□□□□ -2.03
DEP1P31385 TDA2YER071C 381 nt2.4□□□□□ -2.03
DEP1P31385 PEX18YHR160C 852 nt2.4□□□□□ -2.03
DEP1P31385 YHR213WYHR213W 597 nt2.4□□□□□ -2.03
DEP1P31385 YAR062WYAR062W 597 nt2.4□□□□□ -2.03
DEP1P31385 YNL046WYNL046W 519 nt2.4□□□□□ -2.03
DEP1P31385 YOR331CYOR331C 558 nt2.4□□□□□ -2.03
DEP1P31385 YPL142CYPL142C 318 nt2.4□□□□□ -2.03
DEP1P31385 Q0017Q0017 162 nt2.4□□□□□ -2.03
DEP1P31385 TFC3YAL001C 3483 nt2.4□□□□□ -2.03
DEP1P31385 SHS1YDL225W 1656 nt2.4□□□□□ -2.03
DEP1P31385 TRS130YMR218C 3309 nt2.4□□□□□ -2.03
DEP1P31385 YFL002W-BYFL002W-B 1317 nt2.4□□□□□ -2.03
DEP1P31385 YGR161W-AYGR161W-A 1317 nt2.4□□□□□ -2.03
DEP1P31385 YBL100W-AYBL100W-A 1317 nt2.4□□□□□ -2.03
DEP1P31385 YCL020WYCL020W 1317 nt2.4□□□□□ -2.03
DEP1P31385 UBP2YOR124C 3819 nt2.39□□□□□ -2.03
DEP1P31385 snR9snR9 187 nt2.39□□□□□ -2.03
DEP1P31385 EMC4YGL231C 573 nt2.39□□□□□ -2.03
DEP1P31385 MBB1YJL199C 327 nt2.39□□□□□ -2.03
DEP1P31385 SRP21YKL122C 504 nt2.39□□□□□ -2.03
DEP1P31385 RPS16AYMR143W 432 nt2.39□□□□□ -2.03
DEP1P31385 CSM4YPL200W 471 nt2.39□□□□□ -2.03
DEP1P31385 YPR172WYPR172W 603 nt2.39□□□□□ -2.03
DEP1P31385 YLR446WYLR446W 1302 nt2.39□□□□□ -2.03
DEP1P31385 MSB1YOR188W 3414 nt2.39□□□□□ -2.03
DEP1P31385 DNA2YHR164C 4569 nt2.39□□□□□ -2.03
DEP1P31385 RGA1YOR127W 3024 nt2.38□□□□□ -2.03
DEP1P31385 TIF35YDR429C 825 nt2.38□□□□□ -2.03
DEP1P31385 FAR7YFR008W 666 nt2.38□□□□□ -2.03
DEP1P31385 YGR109W-AYGR109W-A 873 nt2.38□□□□□ -2.03
Retrieved 100 of 7,029 protein–RNA pairs in 21.5 ms