Protein–RNA interactions for Protein: P28328

PEX2, Peroxisome biogenesis factor 2, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX2P28328 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PEX2P28328 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PEX2P28328 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PEX2P28328 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PEX2P28328 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PEX2P28328 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PEX2P28328 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PEX2P28328 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PEX2P28328 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PEX2P28328 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
PEX2P28328 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.41■□□□□ 0.7
PEX2P28328 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.41■□□□□ 0.7
PEX2P28328 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.41■□□□□ 0.7
PEX2P28328 AL034346.1-201ENST00000568244 1277 ntBASIC19.41■□□□□ 0.7
PEX2P28328 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PEX2P28328 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PEX2P28328 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PEX2P28328 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.41■□□□□ 0.7
PEX2P28328 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PEX2P28328 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PEX2P28328 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
PEX2P28328 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.4■□□□□ 0.7
PEX2P28328 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.4■□□□□ 0.7
PEX2P28328 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
PEX2P28328 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.4■□□□□ 0.7
PEX2P28328 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.4■□□□□ 0.7
PEX2P28328 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PEX2P28328 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PEX2P28328 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.4■□□□□ 0.7
PEX2P28328 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.4■□□□□ 0.7
PEX2P28328 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.4■□□□□ 0.7
PEX2P28328 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PEX2P28328 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.4■□□□□ 0.7
PEX2P28328 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.4■□□□□ 0.7
PEX2P28328 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PEX2P28328 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PEX2P28328 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PEX2P28328 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PEX2P28328 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PEX2P28328 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.4■□□□□ 0.7
PEX2P28328 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PEX2P28328 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PEX2P28328 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PEX2P28328 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PEX2P28328 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PEX2P28328 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PEX2P28328 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
PEX2P28328 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PEX2P28328 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PEX2P28328 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PEX2P28328 AC010980.1-201ENST00000587192 1142 ntBASIC19.39■□□□□ 0.69
PEX2P28328 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.39■□□□□ 0.69
PEX2P28328 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PEX2P28328 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PEX2P28328 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PEX2P28328 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PEX2P28328 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PEX2P28328 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
PEX2P28328 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
PEX2P28328 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PEX2P28328 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PEX2P28328 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PEX2P28328 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
PEX2P28328 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.38■□□□□ 0.69
PEX2P28328 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.38■□□□□ 0.69
PEX2P28328 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PEX2P28328 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PEX2P28328 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
PEX2P28328 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PEX2P28328 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PEX2P28328 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PEX2P28328 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.37■□□□□ 0.69
PEX2P28328 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PEX2P28328 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.37■□□□□ 0.69
PEX2P28328 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.37■□□□□ 0.69
PEX2P28328 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PEX2P28328 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PEX2P28328 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.37■□□□□ 0.69
PEX2P28328 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
PEX2P28328 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.37■□□□□ 0.69
PEX2P28328 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.37■□□□□ 0.69
PEX2P28328 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.37■□□□□ 0.69
PEX2P28328 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
PEX2P28328 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PEX2P28328 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.37■□□□□ 0.69
PEX2P28328 AL451085.2-201ENST00000605085 799 ntBASIC19.37■□□□□ 0.69
PEX2P28328 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PEX2P28328 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PEX2P28328 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PEX2P28328 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PEX2P28328 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.37■□□□□ 0.69
PEX2P28328 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PEX2P28328 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
PEX2P28328 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PEX2P28328 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PEX2P28328 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PEX2P28328 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
PEX2P28328 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
PEX2P28328 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
PEX2P28328 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms