Protein–RNA interactions for Protein: P25846

MSH1, DNA mismatch repair protein MSH1, mitochondrial, yeastyeast

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH1P25846 DYN1YKR054C 12279 nt3.17□□□□□ -1.9
MSH1P25846 RMT2YDR465C 1239 nt3.17□□□□□ -1.9
MSH1P25846 BAT1YHR208W 1182 nt3.17□□□□□ -1.9
MSH1P25846 RPS22AYJL190C 393 nt3.17□□□□□ -1.9
MSH1P25846 AIM36YMR157C 768 nt3.17□□□□□ -1.9
MSH1P25846 YOR385WYOR385W 873 nt3.17□□□□□ -1.9
MSH1P25846 YPR014CYPR014C 330 nt3.17□□□□□ -1.9
MSH1P25846 YOL057WYOL057W 2136 nt3.17□□□□□ -1.9
MSH1P25846 ESL2YKR096W 3588 nt3.16□□□□□ -1.9
MSH1P25846 YDR193WYDR193W 399 nt3.16□□□□□ -1.9
MSH1P25846 YGL015CYGL015C 393 nt3.16□□□□□ -1.9
MSH1P25846 tR(ACG)Q2tR(ACG)Q2 74 nt3.16□□□□□ -1.9
MSH1P25846 MRP49YKL167C 414 nt3.16□□□□□ -1.9
MSH1P25846 FYV7YLR068W 456 nt3.16□□□□□ -1.9
MSH1P25846 MRPL44YMR225C 297 nt3.16□□□□□ -1.9
MSH1P25846 RIO2YNL207W 1278 nt3.16□□□□□ -1.9
MSH1P25846 OST2YOR103C 393 nt3.16□□□□□ -1.9
MSH1P25846 snR42snR42 351 nt3.16□□□□□ -1.9
MSH1P25846 BI4Q0120 1917 nt3.16□□□□□ -1.9
MSH1P25846 GDI1YER136W 1356 nt3.15□□□□□ -1.9
MSH1P25846 HEH2YDR458C 1992 nt3.15□□□□□ -1.91
MSH1P25846 SPO13YHR014W 876 nt3.15□□□□□ -1.91
MSH1P25846 YAL037WYAL037W 804 nt3.15□□□□□ -1.91
MSH1P25846 YPR145C-AYPR145C-A 237 nt3.15□□□□□ -1.91
MSH1P25846 BFR1YOR198C 1413 nt3.15□□□□□ -1.91
MSH1P25846 RIF1YBR275C 5751 nt3.15□□□□□ -1.91
MSH1P25846 KIN82YCR091W 2163 nt3.14□□□□□ -1.91
MSH1P25846 ICR1ICR1 3199 nt3.14□□□□□ -1.91
MSH1P25846 HNT1YDL125C 477 nt3.14□□□□□ -1.91
MSH1P25846 YMR31YFR049W 372 nt3.14□□□□□ -1.91
MSH1P25846 DFG10YIL049W 762 nt3.14□□□□□ -1.91
MSH1P25846 YKL044WYKL044W 321 nt3.14□□□□□ -1.91
MSH1P25846 HRI1YLR301W 735 nt3.14□□□□□ -1.91
MSH1P25846 YGR067CYGR067C 2415 nt3.14□□□□□ -1.91
MSH1P25846 SNU56YDR240C 1479 nt3.14□□□□□ -1.91
MSH1P25846 ITC1YGL133W 3795 nt3.14□□□□□ -1.91
MSH1P25846 RGL1YPL066W 1440 nt3.13□□□□□ -1.91
MSH1P25846 MET5YJR137C 4329 nt3.13□□□□□ -1.91
MSH1P25846 TRZ1YKR079C 2517 nt3.13□□□□□ -1.91
MSH1P25846 RPL9AYGL147C 576 nt3.13□□□□□ -1.91
MSH1P25846 YGR042WYGR042W 816 nt3.13□□□□□ -1.91
MSH1P25846 TCD1YHR003C 1290 nt3.13□□□□□ -1.91
MSH1P25846 SDO1YLR022C 753 nt3.13□□□□□ -1.91
MSH1P25846 YLR264C-AYLR264C-A 117 nt3.13□□□□□ -1.91
MSH1P25846 YPL205CYPL205C 345 nt3.13□□□□□ -1.91
MSH1P25846 POL3YDL102W 3294 nt3.13□□□□□ -1.91
MSH1P25846 SSF2YDR312W 1362 nt3.12□□□□□ -1.91
MSH1P25846 TSC11YER093C 4293 nt3.12□□□□□ -1.91
MSH1P25846 OTU2YHL013C 924 nt3.12□□□□□ -1.91
MSH1P25846 YHR175W-AYHR175W-A 150 nt3.12□□□□□ -1.91
MSH1P25846 SVS1YPL163C 783 nt3.12□□□□□ -1.91
MSH1P25846 RRG8YPR116W 834 nt3.12□□□□□ -1.91
MSH1P25846 STE23YLR389C 3084 nt3.12□□□□□ -1.91
MSH1P25846 NTO1YPR031W 2247 nt3.12□□□□□ -1.91
MSH1P25846 PAM1YDR251W 2493 nt3.12□□□□□ -1.91
MSH1P25846 FLO1YAR050W 4614 nt3.12□□□□□ -1.91
MSH1P25846 CBS1YDL069C 690 nt3.11□□□□□ -1.91
MSH1P25846 tC(GCA)BtC(GCA)B 72 nt3.11□□□□□ -1.91
MSH1P25846 tC(GCA)GtC(GCA)G 72 nt3.11□□□□□ -1.91
MSH1P25846 tC(GCA)P1tC(GCA)P1 72 nt3.11□□□□□ -1.91
MSH1P25846 tC(GCA)P2tC(GCA)P2 72 nt3.11□□□□□ -1.91
MSH1P25846 RPL16AYIL133C 600 nt3.11□□□□□ -1.91
MSH1P25846 YJL007CYJL007C 315 nt3.11□□□□□ -1.91
MSH1P25846 PAU23YLR037C 375 nt3.11□□□□□ -1.91
MSH1P25846 YHC1YLR298C 696 nt3.11□□□□□ -1.91
MSH1P25846 YBR209WYBR209W 318 nt3.11□□□□□ -1.91
MSH1P25846 SOK1YDR006C 2706 nt3.11□□□□□ -1.91
MSH1P25846 TOM1YDR457W 9807 nt3.11□□□□□ -1.91
MSH1P25846 SIN3YOL004W 4611 nt3.1□□□□□ -1.91
MSH1P25846 YCR081C-AYCR081C-A 237 nt3.1□□□□□ -1.91
MSH1P25846 AHC2YCR082W 387 nt3.1□□□□□ -1.91
MSH1P25846 TIM11YDR322C-A 291 nt3.1□□□□□ -1.91
MSH1P25846 YHL006W-AYHL006W-A 354 nt3.1□□□□□ -1.91
MSH1P25846 YPL034WYPL034W 498 nt3.1□□□□□ -1.91
MSH1P25846 RSA1YPL193W 1146 nt3.1□□□□□ -1.91
MSH1P25846 CWC22YGR278W 1734 nt3.1□□□□□ -1.91
MSH1P25846 MOT1YPL082C 5604 nt3.1□□□□□ -1.91
MSH1P25846 RAX2YLR084C 3663 nt3.09□□□□□ -1.91
MSH1P25846 RGR1YLR071C 3249 nt3.09□□□□□ -1.91
MSH1P25846 YER107W-AYER107W-A 321 nt3.09□□□□□ -1.91
MSH1P25846 YHR086W-AYHR086W-A 162 nt3.09□□□□□ -1.91
MSH1P25846 YLR302CYLR302C 363 nt3.09□□□□□ -1.91
MSH1P25846 YOR296WYOR296W 3870 nt3.09□□□□□ -1.92
MSH1P25846 PUF6YDR496C 1971 nt3.09□□□□□ -1.92
MSH1P25846 FUS1YCL027W 1539 nt3.09□□□□□ -1.92
MSH1P25846 NDT80YHR124W 1884 nt3.08□□□□□ -1.92
MSH1P25846 YDR118W-AYDR118W-A 117 nt3.08□□□□□ -1.92
MSH1P25846 tF(GAA)DtF(GAA)D 73 nt3.08□□□□□ -1.92
MSH1P25846 tF(GAA)NtF(GAA)N 73 nt3.08□□□□□ -1.92
MSH1P25846 YIL054WYIL054W 318 nt3.08□□□□□ -1.92
MSH1P25846 APC9YLR102C 798 nt3.08□□□□□ -1.92
MSH1P25846 HHT2YNL031C 411 nt3.08□□□□□ -1.92
MSH1P25846 YOL150CYOL150C 312 nt3.08□□□□□ -1.92
MSH1P25846 ATX2YOR079C 942 nt3.08□□□□□ -1.92
MSH1P25846 APC2YLR127C 2562 nt3.08□□□□□ -1.92
MSH1P25846 YIL169CYIL169C 2988 nt3.08□□□□□ -1.92
MSH1P25846 CAF120YNL278W 3183 nt3.07□□□□□ -1.92
MSH1P25846 NPR3YHL023C 3441 nt3.07□□□□□ -1.92
MSH1P25846 SPC1YJR010C-A 285 nt3.07□□□□□ -1.92
MSH1P25846 ARV1YLR242C 966 nt3.07□□□□□ -1.92
Retrieved 100 of 7,029 protein–RNA pairs in 18.8 ms