Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 AC110285.6-201ENST00000617652 491 ntBASIC19.15■□□□□ 0.66
TNFRSF1BP20333 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.15■□□□□ 0.66
TNFRSF1BP20333 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TNFRSF1BP20333 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.15■□□□□ 0.66
TNFRSF1BP20333 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TNFRSF1BP20333 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TNFRSF1BP20333 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TNFRSF1BP20333 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.15■□□□□ 0.66
TNFRSF1BP20333 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
TNFRSF1BP20333 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TNFRSF1BP20333 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
TNFRSF1BP20333 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TNFRSF1BP20333 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
TNFRSF1BP20333 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.14■□□□□ 0.65
TNFRSF1BP20333 MIR939-201ENST00000401314 82 ntBASIC19.14■□□□□ 0.65
TNFRSF1BP20333 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.14■□□□□ 0.65
TNFRSF1BP20333 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.14■□□□□ 0.65
TNFRSF1BP20333 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TNFRSF1BP20333 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TNFRSF1BP20333 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
TNFRSF1BP20333 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TNFRSF1BP20333 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.14■□□□□ 0.65
TNFRSF1BP20333 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
TNFRSF1BP20333 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TNFRSF1BP20333 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
TNFRSF1BP20333 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
TNFRSF1BP20333 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TNFRSF1BP20333 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
TNFRSF1BP20333 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.13■□□□□ 0.65
TNFRSF1BP20333 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TNFRSF1BP20333 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TNFRSF1BP20333 EDA-201ENST00000338901 1233 ntBASIC19.13■□□□□ 0.65
TNFRSF1BP20333 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.13■□□□□ 0.65
TNFRSF1BP20333 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.13■□□□□ 0.65
TNFRSF1BP20333 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TNFRSF1BP20333 AC053503.5-201ENST00000601508 636 ntBASIC19.13■□□□□ 0.65
TNFRSF1BP20333 RASA4CP-201ENST00000424092 1398 ntBASIC19.13■□□□□ 0.65
TNFRSF1BP20333 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.13■□□□□ 0.65
TNFRSF1BP20333 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TNFRSF1BP20333 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TNFRSF1BP20333 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.13■□□□□ 0.65
TNFRSF1BP20333 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNFRSF1BP20333 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.12■□□□□ 0.65
TNFRSF1BP20333 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.12■□□□□ 0.65
TNFRSF1BP20333 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNFRSF1BP20333 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.12■□□□□ 0.65
TNFRSF1BP20333 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TNFRSF1BP20333 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.12■□□□□ 0.65
TNFRSF1BP20333 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.12■□□□□ 0.65
TNFRSF1BP20333 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TNFRSF1BP20333 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.12■□□□□ 0.65
TNFRSF1BP20333 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.12■□□□□ 0.65
TNFRSF1BP20333 AL031432.3-201ENST00000607698 485 ntBASIC19.12■□□□□ 0.65
TNFRSF1BP20333 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNFRSF1BP20333 AL355001.2-201ENST00000620617 1191 ntBASIC19.12■□□□□ 0.65
TNFRSF1BP20333 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNFRSF1BP20333 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TNFRSF1BP20333 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNFRSF1BP20333 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
TNFRSF1BP20333 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNFRSF1BP20333 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNFRSF1BP20333 AC011484.1-201ENST00000377652 1995 ntBASIC19.12■□□□□ 0.65
TNFRSF1BP20333 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
TNFRSF1BP20333 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
TNFRSF1BP20333 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNFRSF1BP20333 AP004607.4-201ENST00000530158 1459 ntBASIC19.11■□□□□ 0.65
TNFRSF1BP20333 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.11■□□□□ 0.65
TNFRSF1BP20333 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNFRSF1BP20333 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNFRSF1BP20333 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TNFRSF1BP20333 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNFRSF1BP20333 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNFRSF1BP20333 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.11■□□□□ 0.65
TNFRSF1BP20333 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNFRSF1BP20333 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.11■□□□□ 0.65
TNFRSF1BP20333 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNFRSF1BP20333 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TNFRSF1BP20333 AL162377.1-201ENST00000618844 1793 ntBASIC19.11■□□□□ 0.65
TNFRSF1BP20333 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.11■□□□□ 0.65
TNFRSF1BP20333 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TNFRSF1BP20333 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNFRSF1BP20333 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TNFRSF1BP20333 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TNFRSF1BP20333 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNFRSF1BP20333 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
TNFRSF1BP20333 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TNFRSF1BP20333 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TNFRSF1BP20333 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TNFRSF1BP20333 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TNFRSF1BP20333 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TNFRSF1BP20333 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TNFRSF1BP20333 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.1■□□□□ 0.65
TNFRSF1BP20333 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.1■□□□□ 0.65
TNFRSF1BP20333 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TNFRSF1BP20333 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TNFRSF1BP20333 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.1■□□□□ 0.65
TNFRSF1BP20333 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.1■□□□□ 0.65
TNFRSF1BP20333 AL136967.2-201ENST00000623968 743 ntBASIC19.1■□□□□ 0.65
TNFRSF1BP20333 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
TNFRSF1BP20333 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms