Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
VCLP18206 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VCLP18206 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.68■□□□□ 0.9
VCLP18206 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.68■□□□□ 0.9
VCLP18206 SLC7A5P1-201ENST00000568957 537 ntBASIC20.68■□□□□ 0.9
VCLP18206 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.68■□□□□ 0.9
VCLP18206 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.68■□□□□ 0.9
VCLP18206 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.68■□□□□ 0.9
VCLP18206 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
VCLP18206 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.68■□□□□ 0.9
VCLP18206 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VCLP18206 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VCLP18206 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VCLP18206 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.67■□□□□ 0.9
VCLP18206 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
VCLP18206 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
VCLP18206 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VCLP18206 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VCLP18206 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.67■□□□□ 0.9
VCLP18206 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.67■□□□□ 0.9
VCLP18206 AC080038.1-201ENST00000611274 1154 ntBASIC20.67■□□□□ 0.9
VCLP18206 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.67■□□□□ 0.9
VCLP18206 AC011767.1-201ENST00000617410 1153 ntBASIC20.67■□□□□ 0.9
VCLP18206 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.67■□□□□ 0.9
VCLP18206 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
VCLP18206 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
VCLP18206 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
VCLP18206 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.67■□□□□ 0.9
VCLP18206 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.67■□□□□ 0.9
VCLP18206 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
VCLP18206 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
VCLP18206 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.66■□□□□ 0.9
VCLP18206 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.66■□□□□ 0.9
VCLP18206 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VCLP18206 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VCLP18206 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VCLP18206 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VCLP18206 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
VCLP18206 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.66■□□□□ 0.9
VCLP18206 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.66■□□□□ 0.9
VCLP18206 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.66■□□□□ 0.9
VCLP18206 KRT16P2-201ENST00000414673 1423 ntBASIC20.66■□□□□ 0.9
VCLP18206 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.66■□□□□ 0.9
VCLP18206 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.66■□□□□ 0.9
VCLP18206 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
VCLP18206 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
VCLP18206 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
VCLP18206 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VCLP18206 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VCLP18206 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VCLP18206 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VCLP18206 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
VCLP18206 AL391422.3-201ENST00000603791 2761 ntBASIC20.65■□□□□ 0.9
VCLP18206 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
VCLP18206 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VCLP18206 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VCLP18206 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VCLP18206 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VCLP18206 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VCLP18206 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VCLP18206 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VCLP18206 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
VCLP18206 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
VCLP18206 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
VCLP18206 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
VCLP18206 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
VCLP18206 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
VCLP18206 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VCLP18206 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
VCLP18206 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.65■□□□□ 0.9
VCLP18206 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
VCLP18206 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
VCLP18206 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.65■□□□□ 0.9
VCLP18206 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
VCLP18206 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
VCLP18206 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VCLP18206 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VCLP18206 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.64■□□□□ 0.89
VCLP18206 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
VCLP18206 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.64■□□□□ 0.89
VCLP18206 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
VCLP18206 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.64■□□□□ 0.89
VCLP18206 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VCLP18206 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
VCLP18206 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VCLP18206 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
VCLP18206 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
VCLP18206 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
VCLP18206 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
VCLP18206 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.63■□□□□ 0.89
VCLP18206 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.63■□□□□ 0.89
VCLP18206 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
VCLP18206 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
VCLP18206 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.63■□□□□ 0.89
VCLP18206 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.63■□□□□ 0.89
VCLP18206 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
VCLP18206 MFSD11-216ENST00000590393 1141 ntBASIC20.63■□□□□ 0.89
VCLP18206 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VCLP18206 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.63■□□□□ 0.89
VCLP18206 RARRES2P11-201ENST00000635158 484 ntBASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms