Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.46■□□□□ 0.71
NCK1P16333 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
NCK1P16333 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.46■□□□□ 0.71
NCK1P16333 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
NCK1P16333 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NCK1P16333 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NCK1P16333 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NCK1P16333 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
NCK1P16333 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NCK1P16333 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.45■□□□□ 0.7
NCK1P16333 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
NCK1P16333 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
NCK1P16333 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.45■□□□□ 0.7
NCK1P16333 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
NCK1P16333 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.45■□□□□ 0.7
NCK1P16333 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NCK1P16333 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
NCK1P16333 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
NCK1P16333 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.45■□□□□ 0.7
NCK1P16333 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
NCK1P16333 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
NCK1P16333 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.45■□□□□ 0.7
NCK1P16333 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
NCK1P16333 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NCK1P16333 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NCK1P16333 AC055733.4-201ENST00000638462 1354 ntBASIC19.44■□□□□ 0.7
NCK1P16333 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
NCK1P16333 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NCK1P16333 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NCK1P16333 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NCK1P16333 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.44■□□□□ 0.7
NCK1P16333 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.44■□□□□ 0.7
NCK1P16333 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
NCK1P16333 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NCK1P16333 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NCK1P16333 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCK1P16333 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.43■□□□□ 0.7
NCK1P16333 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.43■□□□□ 0.7
NCK1P16333 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.43■□□□□ 0.7
NCK1P16333 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
NCK1P16333 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.43■□□□□ 0.7
NCK1P16333 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.43■□□□□ 0.7
NCK1P16333 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCK1P16333 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.43■□□□□ 0.7
NCK1P16333 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCK1P16333 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.43■□□□□ 0.7
NCK1P16333 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
NCK1P16333 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCK1P16333 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCK1P16333 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
NCK1P16333 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.43■□□□□ 0.7
NCK1P16333 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.43■□□□□ 0.7
NCK1P16333 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
NCK1P16333 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.42■□□□□ 0.7
NCK1P16333 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.42■□□□□ 0.7
NCK1P16333 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
NCK1P16333 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NCK1P16333 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.42■□□□□ 0.7
NCK1P16333 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCK1P16333 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCK1P16333 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NCK1P16333 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCK1P16333 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
NCK1P16333 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NCK1P16333 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCK1P16333 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.42■□□□□ 0.7
NCK1P16333 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.42■□□□□ 0.7
NCK1P16333 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NCK1P16333 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCK1P16333 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NCK1P16333 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.42■□□□□ 0.7
NCK1P16333 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.42■□□□□ 0.7
NCK1P16333 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCK1P16333 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.42■□□□□ 0.7
NCK1P16333 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
NCK1P16333 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
NCK1P16333 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCK1P16333 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCK1P16333 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.41■□□□□ 0.7
NCK1P16333 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.41■□□□□ 0.7
NCK1P16333 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCK1P16333 AC133561.4-201ENST00000566112 224 ntBASIC19.41■□□□□ 0.7
NCK1P16333 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NCK1P16333 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
NCK1P16333 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCK1P16333 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCK1P16333 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.41■□□□□ 0.7
NCK1P16333 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
NCK1P16333 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NCK1P16333 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCK1P16333 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCK1P16333 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.4■□□□□ 0.7
NCK1P16333 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.4■□□□□ 0.7
NCK1P16333 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NCK1P16333 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NCK1P16333 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NCK1P16333 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NCK1P16333 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.4■□□□□ 0.7
NCK1P16333 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.4■□□□□ 0.7
NCK1P16333 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms