Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PF4V1P10720 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PF4V1P10720 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PF4V1P10720 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PF4V1P10720 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.32■□□□□ 0.2
PF4V1P10720 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PF4V1P10720 DYM-203ENST00000442713 2147 ntTSL 2 BASIC16.32■□□□□ 0.2
PF4V1P10720 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PF4V1P10720 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PF4V1P10720 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PF4V1P10720 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PF4V1P10720 KRT18P6-201ENST00000555540 1265 ntBASIC16.32■□□□□ 0.2
PF4V1P10720 AC133552.2-202ENST00000575694 574 ntBASIC16.32■□□□□ 0.2
PF4V1P10720 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC16.32■□□□□ 0.2
PF4V1P10720 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PF4V1P10720 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PF4V1P10720 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
PF4V1P10720 AC069236.1-201ENST00000604339 616 ntBASIC16.32■□□□□ 0.2
PF4V1P10720 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC16.32■□□□□ 0.2
PF4V1P10720 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PF4V1P10720 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.32■□□□□ 0.2
PF4V1P10720 AC133041.1-202ENST00000642053 222 ntBASIC16.32■□□□□ 0.2
PF4V1P10720 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PF4V1P10720 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PF4V1P10720 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC16.31■□□□□ 0.2
PF4V1P10720 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PF4V1P10720 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PF4V1P10720 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PF4V1P10720 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PF4V1P10720 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PF4V1P10720 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PF4V1P10720 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PF4V1P10720 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PF4V1P10720 CYP2T1P-201ENST00000432607 1285 ntBASIC16.31■□□□□ 0.2
PF4V1P10720 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC16.31■□□□□ 0.2
PF4V1P10720 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC16.31■□□□□ 0.2
PF4V1P10720 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC16.31■□□□□ 0.2
PF4V1P10720 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC16.31■□□□□ 0.2
PF4V1P10720 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PF4V1P10720 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PF4V1P10720 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC16.31■□□□□ 0.2
PF4V1P10720 WWC2-AS2-201ENST00000578387 2183 ntBASIC16.31■□□□□ 0.2
PF4V1P10720 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PF4V1P10720 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PF4V1P10720 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PF4V1P10720 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PF4V1P10720 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC16.31■□□□□ 0.2
PF4V1P10720 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PF4V1P10720 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PF4V1P10720 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PF4V1P10720 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PF4V1P10720 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PF4V1P10720 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC16.3■□□□□ 0.2
PF4V1P10720 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PF4V1P10720 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PF4V1P10720 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
PF4V1P10720 AC138932.1-201ENST00000534164 6830 ntBASIC16.3■□□□□ 0.2
PF4V1P10720 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PF4V1P10720 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC16.3■□□□□ 0.2
PF4V1P10720 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC16.3■□□□□ 0.2
PF4V1P10720 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PF4V1P10720 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PF4V1P10720 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PF4V1P10720 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PF4V1P10720 APTR-203ENST00000430801 583 ntTSL 5 BASIC16.3■□□□□ 0.2
PF4V1P10720 AC069152.1-201ENST00000438030 544 ntBASIC16.3■□□□□ 0.2
PF4V1P10720 GUSBP6-202ENST00000438529 1198 ntBASIC16.3■□□□□ 0.2
PF4V1P10720 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PF4V1P10720 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC16.3■□□□□ 0.2
PF4V1P10720 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PF4V1P10720 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PF4V1P10720 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC16.3■□□□□ 0.2
PF4V1P10720 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PF4V1P10720 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC16.3■□□□□ 0.2
PF4V1P10720 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PF4V1P10720 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PF4V1P10720 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC16.3■□□□□ 0.2
PF4V1P10720 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC16.3■□□□□ 0.2
PF4V1P10720 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PF4V1P10720 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC16.29■□□□□ 0.2
PF4V1P10720 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
PF4V1P10720 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PF4V1P10720 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PF4V1P10720 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC16.29■□□□□ 0.2
PF4V1P10720 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.29■□□□□ 0.2
PF4V1P10720 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PF4V1P10720 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PF4V1P10720 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC16.29■□□□□ 0.2
PF4V1P10720 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
PF4V1P10720 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC16.29■□□□□ 0.2
PF4V1P10720 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.29■□□□□ 0.2
PF4V1P10720 MIR4758-201ENST00000577688 71 ntBASIC16.29■□□□□ 0.2
PF4V1P10720 FGF8-207ENST00000618991 856 ntTSL 3 BASIC16.29■□□□□ 0.2
PF4V1P10720 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PF4V1P10720 TMEM191A-211ENST00000637163 1067 ntBASIC16.29■□□□□ 0.2
PF4V1P10720 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PF4V1P10720 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
PF4V1P10720 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PF4V1P10720 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PF4V1P10720 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms