Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.64■■□□□ 1.05
RARAP10276 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
RARAP10276 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RARAP10276 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.63■■□□□ 1.05
RARAP10276 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RARAP10276 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RARAP10276 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
RARAP10276 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RARAP10276 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RARAP10276 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RARAP10276 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
RARAP10276 SLC7A5P2-201ENST00000553010 536 ntBASIC21.63■■□□□ 1.05
RARAP10276 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
RARAP10276 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
RARAP10276 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
RARAP10276 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RARAP10276 KRT16P2-201ENST00000414673 1423 ntBASIC21.63■■□□□ 1.05
RARAP10276 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.62■■□□□ 1.05
RARAP10276 AC007225.1-201ENST00000566331 1836 ntBASIC21.62■■□□□ 1.05
RARAP10276 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RARAP10276 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.62■■□□□ 1.05
RARAP10276 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
RARAP10276 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.62■■□□□ 1.05
RARAP10276 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RARAP10276 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RARAP10276 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RARAP10276 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RARAP10276 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.62■■□□□ 1.05
RARAP10276 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.62■■□□□ 1.05
RARAP10276 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.62■■□□□ 1.05
RARAP10276 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
RARAP10276 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RARAP10276 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
RARAP10276 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.62■■□□□ 1.05
RARAP10276 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
RARAP10276 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.62■■□□□ 1.05
RARAP10276 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
RARAP10276 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RARAP10276 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RARAP10276 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.62■■□□□ 1.05
RARAP10276 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RARAP10276 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RARAP10276 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
RARAP10276 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RARAP10276 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RARAP10276 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.61■■□□□ 1.05
RARAP10276 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RARAP10276 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RARAP10276 AC097381.1-201ENST00000429019 1296 ntBASIC21.61■■□□□ 1.05
RARAP10276 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.61■■□□□ 1.05
RARAP10276 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.61■■□□□ 1.05
RARAP10276 RARRES2P11-201ENST00000635158 484 ntBASIC21.61■■□□□ 1.05
RARAP10276 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RARAP10276 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RARAP10276 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RARAP10276 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RARAP10276 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RARAP10276 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RARAP10276 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RARAP10276 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RARAP10276 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
RARAP10276 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.6■■□□□ 1.05
RARAP10276 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
RARAP10276 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RARAP10276 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
RARAP10276 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.6■■□□□ 1.05
RARAP10276 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
RARAP10276 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RARAP10276 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
RARAP10276 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RARAP10276 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RARAP10276 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
RARAP10276 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RARAP10276 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RARAP10276 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RARAP10276 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.59■■□□□ 1.05
RARAP10276 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
RARAP10276 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RARAP10276 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
RARAP10276 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.59■■□□□ 1.05
RARAP10276 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.59■■□□□ 1.05
RARAP10276 MIR6821-201ENST00000617625 74 ntBASIC21.59■■□□□ 1.05
RARAP10276 AC120498.10-201ENST00000621827 505 ntBASIC21.59■■□□□ 1.05
RARAP10276 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.59■■□□□ 1.05
RARAP10276 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RARAP10276 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
RARAP10276 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RARAP10276 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RARAP10276 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.58■■□□□ 1.05
RARAP10276 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.58■■□□□ 1.05
RARAP10276 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
RARAP10276 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RARAP10276 AL391422.3-201ENST00000603791 2761 ntBASIC21.58■■□□□ 1.05
RARAP10276 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RARAP10276 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.58■■□□□ 1.05
RARAP10276 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.58■■□□□ 1.05
RARAP10276 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.58■■□□□ 1.05
RARAP10276 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
RARAP10276 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.58■■□□□ 1.05
RARAP10276 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms