Protein–RNA interactions for Protein: P0CH09

RPL40B, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40BP0CH09 YOR146WYOR146W 306 nt1.46□□□□□ -2.18
RPL40BP0CH09 YOR203WYOR203W 354 nt1.46□□□□□ -2.18
RPL40BP0CH09 PRM4YPL156C 855 nt1.46□□□□□ -2.18
RPL40BP0CH09 DFG16YOR030W 1860 nt1.46□□□□□ -2.18
RPL40BP0CH09 NPR1YNL183C 2373 nt1.45□□□□□ -2.18
RPL40BP0CH09 VPS16YPL045W 2397 nt1.45□□□□□ -2.18
RPL40BP0CH09 PET309YLR067C 2898 nt1.45□□□□□ -2.18
RPL40BP0CH09 RNH70YGR276C 1662 nt1.45□□□□□ -2.18
RPL40BP0CH09 IST2YBR086C 2841 nt1.45□□□□□ -2.18
RPL40BP0CH09 POM152YMR129W 4014 nt1.45□□□□□ -2.18
RPL40BP0CH09 YPS5YGL259W 498 nt1.45□□□□□ -2.18
RPL40BP0CH09 PFD1YJL179W 330 nt1.45□□□□□ -2.18
RPL40BP0CH09 YKL069WYKL069W 543 nt1.45□□□□□ -2.18
RPL40BP0CH09 CTP1YBR291C 900 nt1.45□□□□□ -2.18
RPL40BP0CH09 INP51YIL002C 2841 nt1.45□□□□□ -2.18
RPL40BP0CH09 VPS15YBR097W 4365 nt1.45□□□□□ -2.18
RPL40BP0CH09 UTP20YBL004W 7482 nt1.45□□□□□ -2.18
RPL40BP0CH09 IRA1YBR140C 9279 nt1.44□□□□□ -2.18
RPL40BP0CH09 SLM1YIL105C 2061 nt1.44□□□□□ -2.18
RPL40BP0CH09 UTP5YDR398W 1932 nt1.44□□□□□ -2.18
RPL40BP0CH09 POL4YCR014C 1749 nt1.44□□□□□ -2.18
RPL40BP0CH09 TAH1YCR060W 336 nt1.44□□□□□ -2.18
RPL40BP0CH09 YER119C-AYER119C-A 372 nt1.44□□□□□ -2.18
RPL40BP0CH09 COX13YGL191W 390 nt1.44□□□□□ -2.18
RPL40BP0CH09 YMR247W-AYMR247W-A 144 nt1.44□□□□□ -2.18
RPL40BP0CH09 RLF2YPR018W 1821 nt1.44□□□□□ -2.18
RPL40BP0CH09 BUD2YKL092C 3315 nt1.44□□□□□ -2.18
RPL40BP0CH09 YCK3YER123W 1575 nt1.43□□□□□ -2.18
RPL40BP0CH09 TSC13YDL015C 933 nt1.43□□□□□ -2.18
RPL40BP0CH09 YFR010W-AYFR010W-A 189 nt1.43□□□□□ -2.18
RPL40BP0CH09 YKL070WYKL070W 510 nt1.43□□□□□ -2.18
RPL40BP0CH09 HUA2YOR284W 732 nt1.43□□□□□ -2.18
RPL40BP0CH09 YPR146CYPR146C 330 nt1.43□□□□□ -2.18
RPL40BP0CH09 PRP6YBR055C 2700 nt1.43□□□□□ -2.18
RPL40BP0CH09 MAK10YEL053C 2202 nt1.43□□□□□ -2.18
RPL40BP0CH09 YBP1YBR216C 2025 nt1.42□□□□□ -2.18
RPL40BP0CH09 RKM1YPL208W 1752 nt1.42□□□□□ -2.18
RPL40BP0CH09 APC2YLR127C 2562 nt1.42□□□□□ -2.18
RPL40BP0CH09 HLR1YDR528W 1272 nt1.42□□□□□ -2.18
RPL40BP0CH09 PCL5YHR071W 690 nt1.42□□□□□ -2.18
RPL40BP0CH09 DSE3YOR264W 1293 nt1.42□□□□□ -2.18
RPL40BP0CH09 YBR201C-AYBR201C-A 204 nt1.42□□□□□ -2.18
RPL40BP0CH09 DPB3YBR278W 606 nt1.42□□□□□ -2.18
RPL40BP0CH09 YCT1YLL055W 1596 nt1.42□□□□□ -2.18
RPL40BP0CH09 CET1YPL228W 1650 nt1.42□□□□□ -2.18
RPL40BP0CH09 LHS1YKL073W 2646 nt1.41□□□□□ -2.18
RPL40BP0CH09 NOP56YLR197W 1515 nt1.41□□□□□ -2.18
RPL40BP0CH09 MEC1YBR136W 7107 nt1.41□□□□□ -2.18
RPL40BP0CH09 SSP1YHR184W 1716 nt1.41□□□□□ -2.18
RPL40BP0CH09 ARK1YNL020C 1917 nt1.41□□□□□ -2.18
RPL40BP0CH09 YCR081C-AYCR081C-A 237 nt1.41□□□□□ -2.18
RPL40BP0CH09 snR76snR76 109 nt1.41□□□□□ -2.18
RPL40BP0CH09 TCA17YEL048C 459 nt1.41□□□□□ -2.18
RPL40BP0CH09 YIL102CYIL102C 306 nt1.41□□□□□ -2.18
RPL40BP0CH09 VPH2YKL119C 648 nt1.41□□□□□ -2.18
RPL40BP0CH09 TMA7YLR262C-A 195 nt1.41□□□□□ -2.18
RPL40BP0CH09 HRI1YLR301W 735 nt1.41□□□□□ -2.18
RPL40BP0CH09 PRM6YML047C 1059 nt1.41□□□□□ -2.18
RPL40BP0CH09 MFA2YNL145W 117 nt1.41□□□□□ -2.18
RPL40BP0CH09 SRL1YOR247W 633 nt1.41□□□□□ -2.18
RPL40BP0CH09 SLF1YDR515W 1344 nt1.4□□□□□ -2.18
RPL40BP0CH09 RGA2YDR379W 3030 nt1.4□□□□□ -2.18
RPL40BP0CH09 RTG3YBL103C 1461 nt1.4□□□□□ -2.19
RPL40BP0CH09 YIL161WYIL161W 708 nt1.4□□□□□ -2.19
RPL40BP0CH09 YJR023CYJR023C 402 nt1.4□□□□□ -2.19
RPL40BP0CH09 SRN2YLR119W 642 nt1.4□□□□□ -2.19
RPL40BP0CH09 BET5YML077W 480 nt1.4□□□□□ -2.19
RPL40BP0CH09 RAD10YML095C 633 nt1.4□□□□□ -2.19
RPL40BP0CH09 TRM82YDR165W 1335 nt1.4□□□□□ -2.19
RPL40BP0CH09 VPS38YLR360W 1320 nt1.4□□□□□ -2.19
RPL40BP0CH09 YNR066CYNR066C 1311 nt1.4□□□□□ -2.19
RPL40BP0CH09 HOP1YIL072W 1818 nt1.39□□□□□ -2.19
RPL40BP0CH09 YCR099CYCR099C 468 nt1.39□□□□□ -2.19
RPL40BP0CH09 YDR169C-AYDR169C-A 150 nt1.39□□□□□ -2.19
RPL40BP0CH09 ATP17YDR377W 306 nt1.39□□□□□ -2.19
RPL40BP0CH09 YFH7YFR007W 1062 nt1.39□□□□□ -2.19
RPL40BP0CH09 YGL069CYGL069C 465 nt1.39□□□□□ -2.19
RPL40BP0CH09 YGR204C-AYGR204C-A 114 nt1.39□□□□□ -2.19
RPL40BP0CH09 DSE2YHR143W 978 nt1.39□□□□□ -2.19
RPL40BP0CH09 RPA12YJR063W 378 nt1.39□□□□□ -2.19
RPL40BP0CH09 RLP24YLR009W 600 nt1.39□□□□□ -2.19
RPL40BP0CH09 URA5YML106W 681 nt1.39□□□□□ -2.19
RPL40BP0CH09 YMR147WYMR147W 672 nt1.39□□□□□ -2.19
RPL40BP0CH09 YMR181CYMR181C 465 nt1.39□□□□□ -2.19
RPL40BP0CH09 RPL16BYNL069C 597 nt1.39□□□□□ -2.19
RPL40BP0CH09 YOL050CYOL050C 321 nt1.39□□□□□ -2.19
RPL40BP0CH09 FIG1YBR040W 897 nt1.39□□□□□ -2.19
RPL40BP0CH09 MES1YGR264C 2256 nt1.39□□□□□ -2.19
RPL40BP0CH09 RTT101YJL047C 2529 nt1.39□□□□□ -2.19
RPL40BP0CH09 BRE5YNR051C 1548 nt1.39□□□□□ -2.19
RPL40BP0CH09 NAM7YMR080C 2916 nt1.38□□□□□ -2.19
RPL40BP0CH09 RPS17BYDR447C 411 nt1.38□□□□□ -2.19
RPL40BP0CH09 COBQ0105 1158 nt1.38□□□□□ -2.19
RPL40BP0CH09 IRC6YFR043C 714 nt1.38□□□□□ -2.19
RPL40BP0CH09 SHE2YKL130C 741 nt1.38□□□□□ -2.19
RPL40BP0CH09 NYV1YLR093C 762 nt1.38□□□□□ -2.19
RPL40BP0CH09 YLR311CYLR311C 348 nt1.38□□□□□ -2.19
RPL40BP0CH09 YOL014WYOL014W 375 nt1.38□□□□□ -2.19
RPL40BP0CH09 ASG1YIL130W 2895 nt1.37□□□□□ -2.19
RPL40BP0CH09 GNT1YOR320C 1476 nt1.37□□□□□ -2.19
Retrieved 100 of 7,029 protein–RNA pairs in 36.8 ms