Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
FREM3P0C091 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FREM3P0C091 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.77■□□□□ 0.6
FREM3P0C091 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.77■□□□□ 0.6
FREM3P0C091 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
FREM3P0C091 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.77■□□□□ 0.6
FREM3P0C091 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
FREM3P0C091 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
FREM3P0C091 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
FREM3P0C091 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
FREM3P0C091 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
FREM3P0C091 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
FREM3P0C091 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FREM3P0C091 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.77■□□□□ 0.6
FREM3P0C091 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
FREM3P0C091 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
FREM3P0C091 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.77■□□□□ 0.6
FREM3P0C091 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
FREM3P0C091 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
FREM3P0C091 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
FREM3P0C091 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
FREM3P0C091 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.76■□□□□ 0.59
FREM3P0C091 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FREM3P0C091 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FREM3P0C091 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
FREM3P0C091 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.76■□□□□ 0.59
FREM3P0C091 MIR4651-201ENST00000582622 73 ntBASIC18.76■□□□□ 0.59
FREM3P0C091 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FREM3P0C091 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.76■□□□□ 0.59
FREM3P0C091 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.76■□□□□ 0.59
FREM3P0C091 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
FREM3P0C091 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.76■□□□□ 0.59
FREM3P0C091 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FREM3P0C091 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
FREM3P0C091 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.76■□□□□ 0.59
FREM3P0C091 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.76■□□□□ 0.59
FREM3P0C091 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
FREM3P0C091 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
FREM3P0C091 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.76■□□□□ 0.59
FREM3P0C091 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.76■□□□□ 0.59
FREM3P0C091 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
FREM3P0C091 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
FREM3P0C091 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
FREM3P0C091 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FREM3P0C091 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FREM3P0C091 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
FREM3P0C091 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FREM3P0C091 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.75■□□□□ 0.59
FREM3P0C091 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FREM3P0C091 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.75■□□□□ 0.59
FREM3P0C091 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FREM3P0C091 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.75■□□□□ 0.59
FREM3P0C091 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
FREM3P0C091 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.74■□□□□ 0.59
FREM3P0C091 AL591742.1-201ENST00000604433 565 ntBASIC18.74■□□□□ 0.59
FREM3P0C091 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
FREM3P0C091 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
FREM3P0C091 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.74■□□□□ 0.59
FREM3P0C091 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
FREM3P0C091 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
FREM3P0C091 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FREM3P0C091 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.74■□□□□ 0.59
FREM3P0C091 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FREM3P0C091 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
FREM3P0C091 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.74■□□□□ 0.59
FREM3P0C091 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.74■□□□□ 0.59
FREM3P0C091 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
FREM3P0C091 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
FREM3P0C091 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
FREM3P0C091 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
FREM3P0C091 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
FREM3P0C091 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
FREM3P0C091 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.73■□□□□ 0.59
FREM3P0C091 AC008694.1-202ENST00000636953 945 ntBASIC18.73■□□□□ 0.59
FREM3P0C091 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
FREM3P0C091 AC116050.2-201ENST00000612102 1779 ntBASIC18.73■□□□□ 0.59
FREM3P0C091 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
FREM3P0C091 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
FREM3P0C091 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.73■□□□□ 0.59
FREM3P0C091 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
FREM3P0C091 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
FREM3P0C091 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
FREM3P0C091 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
FREM3P0C091 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
FREM3P0C091 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.73■□□□□ 0.59
FREM3P0C091 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
FREM3P0C091 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.73■□□□□ 0.59
FREM3P0C091 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
FREM3P0C091 KRT18P6-201ENST00000555540 1265 ntBASIC18.73■□□□□ 0.59
FREM3P0C091 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.73■□□□□ 0.59
FREM3P0C091 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.73■□□□□ 0.59
FREM3P0C091 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.72■□□□□ 0.59
FREM3P0C091 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.72■□□□□ 0.59
FREM3P0C091 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.72■□□□□ 0.59
FREM3P0C091 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.72■□□□□ 0.59
FREM3P0C091 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
FREM3P0C091 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FREM3P0C091 KRT17P1-201ENST00000399211 1546 ntBASIC18.72■□□□□ 0.59
FREM3P0C091 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
FREM3P0C091 ABHD17AP1-201ENST00000358206 933 ntBASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms