Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ERCC1P07992 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ERCC1P07992 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ERCC1P07992 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.22■□□□□ 0.51
ERCC1P07992 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
ERCC1P07992 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.22■□□□□ 0.51
ERCC1P07992 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.22■□□□□ 0.51
ERCC1P07992 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.22■□□□□ 0.51
ERCC1P07992 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.22■□□□□ 0.51
ERCC1P07992 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ERCC1P07992 AC092437.1-201ENST00000624794 1048 ntBASIC18.22■□□□□ 0.51
ERCC1P07992 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ERCC1P07992 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.22■□□□□ 0.51
ERCC1P07992 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ERCC1P07992 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.22■□□□□ 0.51
ERCC1P07992 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC1P07992 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC1P07992 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.21■□□□□ 0.51
ERCC1P07992 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.21■□□□□ 0.51
ERCC1P07992 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
ERCC1P07992 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
ERCC1P07992 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC1P07992 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.21■□□□□ 0.51
ERCC1P07992 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.21■□□□□ 0.51
ERCC1P07992 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.21■□□□□ 0.51
ERCC1P07992 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.21■□□□□ 0.51
ERCC1P07992 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
ERCC1P07992 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC1P07992 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.21■□□□□ 0.51
ERCC1P07992 AP006587.3-201ENST00000525742 1516 ntBASIC18.21■□□□□ 0.51
ERCC1P07992 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC1P07992 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
ERCC1P07992 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC1P07992 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC1P07992 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
ERCC1P07992 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC1P07992 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
ERCC1P07992 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
ERCC1P07992 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC1P07992 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
ERCC1P07992 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC1P07992 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
ERCC1P07992 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC1P07992 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC1P07992 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC1P07992 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.2■□□□□ 0.5
ERCC1P07992 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC1P07992 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.2■□□□□ 0.5
ERCC1P07992 AC006015.1-201ENST00000429970 570 ntBASIC18.2■□□□□ 0.5
ERCC1P07992 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC1P07992 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
ERCC1P07992 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.2■□□□□ 0.5
ERCC1P07992 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
ERCC1P07992 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC1P07992 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC1P07992 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC1P07992 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC1P07992 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC1P07992 AC092667.1-201ENST00000434301 2586 ntBASIC18.2■□□□□ 0.5
ERCC1P07992 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC1P07992 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC1P07992 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
ERCC1P07992 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
ERCC1P07992 AL157384.1-201ENST00000445995 2473 ntBASIC18.2■□□□□ 0.5
ERCC1P07992 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC1P07992 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC1P07992 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC1P07992 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC1P07992 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
ERCC1P07992 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.19■□□□□ 0.5
ERCC1P07992 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC1P07992 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC1P07992 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC1P07992 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC1P07992 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.19■□□□□ 0.5
ERCC1P07992 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
ERCC1P07992 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.19■□□□□ 0.5
ERCC1P07992 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC1P07992 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC1P07992 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC1P07992 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC1P07992 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC1P07992 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC1P07992 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC1P07992 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC1P07992 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
ERCC1P07992 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.19■□□□□ 0.5
ERCC1P07992 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
ERCC1P07992 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
ERCC1P07992 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
ERCC1P07992 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.18■□□□□ 0.5
ERCC1P07992 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.18■□□□□ 0.5
ERCC1P07992 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ERCC1P07992 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ERCC1P07992 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.18■□□□□ 0.5
ERCC1P07992 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
ERCC1P07992 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ERCC1P07992 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.18■□□□□ 0.5
ERCC1P07992 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.18■□□□□ 0.5
ERCC1P07992 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms