Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
COL1A1P02452 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC25.01■■□□□ 1.59
COL1A1P02452 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
COL1A1P02452 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
COL1A1P02452 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
COL1A1P02452 AC244015.2-201ENST00000616358 1861 ntBASIC25.01■■□□□ 1.59
COL1A1P02452 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC25.01■■□□□ 1.59
COL1A1P02452 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
COL1A1P02452 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
COL1A1P02452 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC25.01■■□□□ 1.59
COL1A1P02452 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC25.01■■□□□ 1.59
COL1A1P02452 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
COL1A1P02452 AC087633.2-202ENST00000565166 1439 ntBASIC25■■□□□ 1.59
COL1A1P02452 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
COL1A1P02452 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC25■■□□□ 1.59
COL1A1P02452 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
COL1A1P02452 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC25■■□□□ 1.59
COL1A1P02452 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC25■■□□□ 1.59
COL1A1P02452 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
COL1A1P02452 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
COL1A1P02452 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC25■■□□□ 1.59
COL1A1P02452 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
COL1A1P02452 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC25■■□□□ 1.59
COL1A1P02452 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC25■■□□□ 1.59
COL1A1P02452 AC008403.3-201ENST00000598924 454 ntBASIC25■■□□□ 1.59
COL1A1P02452 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC25■■□□□ 1.59
COL1A1P02452 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC25■■□□□ 1.59
COL1A1P02452 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC25■■□□□ 1.59
COL1A1P02452 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC24.99■■□□□ 1.59
COL1A1P02452 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC24.99■■□□□ 1.59
COL1A1P02452 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC24.99■■□□□ 1.59
COL1A1P02452 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC24.99■■□□□ 1.59
COL1A1P02452 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
COL1A1P02452 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC24.99■■□□□ 1.59
COL1A1P02452 KRT18P68-201ENST00000392293 1000 ntBASIC24.99■■□□□ 1.59
COL1A1P02452 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC24.99■■□□□ 1.59
COL1A1P02452 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC24.99■■□□□ 1.59
COL1A1P02452 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
COL1A1P02452 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC24.99■■□□□ 1.59
COL1A1P02452 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC24.99■■□□□ 1.59
COL1A1P02452 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
COL1A1P02452 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
COL1A1P02452 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
COL1A1P02452 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
COL1A1P02452 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
COL1A1P02452 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
COL1A1P02452 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC24.98■■□□□ 1.59
COL1A1P02452 AC008550.1-201ENST00000511500 884 ntBASIC24.98■■□□□ 1.59
COL1A1P02452 RHOD-202ENST00000532559 538 ntTSL 3 BASIC24.98■■□□□ 1.59
COL1A1P02452 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
COL1A1P02452 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
COL1A1P02452 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC24.98■■□□□ 1.59
COL1A1P02452 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC24.98■■□□□ 1.59
COL1A1P02452 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
COL1A1P02452 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC24.98■■□□□ 1.59
COL1A1P02452 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
COL1A1P02452 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC24.98■■□□□ 1.59
COL1A1P02452 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
COL1A1P02452 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
COL1A1P02452 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
COL1A1P02452 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
COL1A1P02452 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC24.97■■□□□ 1.59
COL1A1P02452 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
COL1A1P02452 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
COL1A1P02452 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC24.97■■□□□ 1.59
COL1A1P02452 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC24.97■■□□□ 1.59
COL1A1P02452 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
COL1A1P02452 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
COL1A1P02452 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC24.97■■□□□ 1.59
COL1A1P02452 Z98882.1-201ENST00000622160 2253 ntBASIC24.97■■□□□ 1.59
COL1A1P02452 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC24.97■■□□□ 1.59
COL1A1P02452 FBXW4P1-201ENST00000426721 2239 ntBASIC24.96■■□□□ 1.59
COL1A1P02452 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC24.96■■□□□ 1.59
COL1A1P02452 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
COL1A1P02452 UBE2SP1-201ENST00000450587 669 ntBASIC24.96■■□□□ 1.59
COL1A1P02452 SLC29A4P2-201ENST00000504749 1089 ntBASIC24.96■■□□□ 1.59
COL1A1P02452 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC24.96■■□□□ 1.59
COL1A1P02452 KLF2-202ENST00000592003 564 ntTSL 3 BASIC24.96■■□□□ 1.59
COL1A1P02452 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
COL1A1P02452 AL359736.2-201ENST00000621992 437 ntBASIC24.96■■□□□ 1.59
COL1A1P02452 HLA-B-256ENST00000639848 1089 ntBASIC24.96■■□□□ 1.59
COL1A1P02452 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC24.96■■□□□ 1.59
COL1A1P02452 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
COL1A1P02452 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
COL1A1P02452 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
COL1A1P02452 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
COL1A1P02452 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
COL1A1P02452 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
COL1A1P02452 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
COL1A1P02452 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
COL1A1P02452 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
COL1A1P02452 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC24.96■■□□□ 1.59
COL1A1P02452 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC24.96■■□□□ 1.59
COL1A1P02452 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
COL1A1P02452 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
COL1A1P02452 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC24.96■■□□□ 1.59
COL1A1P02452 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC24.95■■□□□ 1.59
COL1A1P02452 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC24.95■■□□□ 1.59
COL1A1P02452 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
COL1A1P02452 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms