Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-AP01891 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-AP01891 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.37■□□□□ 0.37
HLA-AP01891 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-AP01891 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.37■□□□□ 0.37
HLA-AP01891 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.37■□□□□ 0.37
HLA-AP01891 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
HLA-AP01891 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-AP01891 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-AP01891 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-AP01891 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-AP01891 AC087239.1-201ENST00000622671 572 ntBASIC17.37■□□□□ 0.37
HLA-AP01891 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
HLA-AP01891 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-AP01891 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
HLA-AP01891 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-AP01891 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.37■□□□□ 0.37
HLA-AP01891 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-AP01891 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-AP01891 AC099778.1-201ENST00000568593 1911 ntBASIC17.37■□□□□ 0.37
HLA-AP01891 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-AP01891 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-AP01891 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.36■□□□□ 0.37
HLA-AP01891 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-AP01891 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
HLA-AP01891 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-AP01891 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.36■□□□□ 0.37
HLA-AP01891 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-AP01891 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-AP01891 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
HLA-AP01891 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-AP01891 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-AP01891 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-AP01891 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
HLA-AP01891 RBM38-205ENST00000440234 686 ntTSL 2 BASIC17.36■□□□□ 0.37
HLA-AP01891 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC17.36■□□□□ 0.37
HLA-AP01891 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-AP01891 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-AP01891 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-AP01891 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-AP01891 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.36■□□□□ 0.37
HLA-AP01891 AC133637.1-201ENST00000624115 1537 ntBASIC17.36■□□□□ 0.37
HLA-AP01891 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-AP01891 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-AP01891 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.35■□□□□ 0.37
HLA-AP01891 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
HLA-AP01891 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-AP01891 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-AP01891 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.35■□□□□ 0.37
HLA-AP01891 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
HLA-AP01891 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-AP01891 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC17.35■□□□□ 0.37
HLA-AP01891 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-AP01891 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC17.35■□□□□ 0.37
HLA-AP01891 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-AP01891 AL117332.1-201ENST00000622628 974 ntBASIC17.35■□□□□ 0.37
HLA-AP01891 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-AP01891 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-AP01891 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
HLA-AP01891 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.35■□□□□ 0.37
HLA-AP01891 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-AP01891 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
HLA-AP01891 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
HLA-AP01891 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
HLA-AP01891 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-AP01891 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-AP01891 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
HLA-AP01891 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-AP01891 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-AP01891 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-AP01891 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-AP01891 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-AP01891 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
HLA-AP01891 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-AP01891 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC17.34■□□□□ 0.37
HLA-AP01891 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-AP01891 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-AP01891 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-AP01891 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.34■□□□□ 0.37
HLA-AP01891 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-AP01891 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC17.34■□□□□ 0.37
HLA-AP01891 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-AP01891 BX323043.1-201ENST00000641006 1765 ntBASIC17.34■□□□□ 0.37
HLA-AP01891 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-AP01891 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-AP01891 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-AP01891 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-AP01891 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HLA-AP01891 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HLA-AP01891 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HLA-AP01891 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HLA-AP01891 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.33■□□□□ 0.37
HLA-AP01891 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.33■□□□□ 0.37
HLA-AP01891 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-AP01891 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-AP01891 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
HLA-AP01891 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
HLA-AP01891 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-AP01891 AL356740.2-201ENST00000601559 647 ntBASIC17.33■□□□□ 0.36
HLA-AP01891 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms