Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH8O95206 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.89
PCDH8O95206 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH8O95206 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH8O95206 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH8O95206 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH8O95206 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
PCDH8O95206 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.63■□□□□ 0.89
PCDH8O95206 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH8O95206 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH8O95206 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH8O95206 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH8O95206 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH8O95206 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.63■□□□□ 0.89
PCDH8O95206 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDH8O95206 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.63■□□□□ 0.89
PCDH8O95206 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDH8O95206 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDH8O95206 AL589743.5-201ENST00000616611 1050 ntBASIC20.63■□□□□ 0.89
PCDH8O95206 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH8O95206 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.63■□□□□ 0.89
PCDH8O95206 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH8O95206 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH8O95206 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH8O95206 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH8O95206 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH8O95206 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDH8O95206 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.62■□□□□ 0.89
PCDH8O95206 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDH8O95206 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.62■□□□□ 0.89
PCDH8O95206 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH8O95206 KRT18P68-201ENST00000392293 1000 ntBASIC20.62■□□□□ 0.89
PCDH8O95206 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDH8O95206 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH8O95206 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH8O95206 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH8O95206 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH8O95206 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.62■□□□□ 0.89
PCDH8O95206 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH8O95206 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH8O95206 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.61■□□□□ 0.89
PCDH8O95206 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
PCDH8O95206 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH8O95206 AC244015.2-201ENST00000616358 1861 ntBASIC20.61■□□□□ 0.89
PCDH8O95206 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
PCDH8O95206 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH8O95206 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH8O95206 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.61■□□□□ 0.89
PCDH8O95206 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.61■□□□□ 0.89
PCDH8O95206 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH8O95206 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.61■□□□□ 0.89
PCDH8O95206 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH8O95206 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH8O95206 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH8O95206 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
PCDH8O95206 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH8O95206 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.61■□□□□ 0.89
PCDH8O95206 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH8O95206 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH8O95206 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH8O95206 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
PCDH8O95206 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH8O95206 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH8O95206 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.6■□□□□ 0.89
PCDH8O95206 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH8O95206 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.6■□□□□ 0.89
PCDH8O95206 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH8O95206 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH8O95206 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH8O95206 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH8O95206 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH8O95206 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH8O95206 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
PCDH8O95206 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.6■□□□□ 0.89
PCDH8O95206 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
PCDH8O95206 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.6■□□□□ 0.89
PCDH8O95206 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH8O95206 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH8O95206 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH8O95206 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.59■□□□□ 0.89
PCDH8O95206 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH8O95206 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH8O95206 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH8O95206 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PCDH8O95206 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH8O95206 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
PCDH8O95206 POU5F1P3-201ENST00000428824 1078 ntBASIC20.59■□□□□ 0.89
PCDH8O95206 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.59■□□□□ 0.89
PCDH8O95206 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
PCDH8O95206 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.59■□□□□ 0.89
PCDH8O95206 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
PCDH8O95206 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
PCDH8O95206 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.59■□□□□ 0.89
PCDH8O95206 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.59■□□□□ 0.89
PCDH8O95206 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.58■□□□□ 0.89
PCDH8O95206 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.58■□□□□ 0.89
PCDH8O95206 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDH8O95206 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDH8O95206 CYP21A1P-202ENST00000354927 1481 ntBASIC20.58■□□□□ 0.89
PCDH8O95206 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms