Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CSPG5O95196 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CSPG5O95196 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.15■■□□□ 1.14
CSPG5O95196 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC22.15■■□□□ 1.14
CSPG5O95196 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC22.14■■□□□ 1.14
CSPG5O95196 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CSPG5O95196 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
CSPG5O95196 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC22.14■■□□□ 1.13
CSPG5O95196 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
CSPG5O95196 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC22.14■■□□□ 1.13
CSPG5O95196 KRT18P68-201ENST00000392293 1000 ntBASIC22.14■■□□□ 1.13
CSPG5O95196 RN7SL471P-201ENST00000580476 299 ntBASIC22.14■■□□□ 1.13
CSPG5O95196 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC22.14■■□□□ 1.13
CSPG5O95196 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC22.14■■□□□ 1.13
CSPG5O95196 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
CSPG5O95196 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CSPG5O95196 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CSPG5O95196 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22.14■■□□□ 1.13
CSPG5O95196 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC22.14■■□□□ 1.13
CSPG5O95196 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC22.14■■□□□ 1.13
CSPG5O95196 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.14■■□□□ 1.13
CSPG5O95196 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CSPG5O95196 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CSPG5O95196 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CSPG5O95196 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CSPG5O95196 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CSPG5O95196 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC22.13■■□□□ 1.13
CSPG5O95196 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CSPG5O95196 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC22.13■■□□□ 1.13
CSPG5O95196 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
CSPG5O95196 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
CSPG5O95196 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CSPG5O95196 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
CSPG5O95196 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CSPG5O95196 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC22.13■■□□□ 1.13
CSPG5O95196 SLC29A4P2-201ENST00000504749 1089 ntBASIC22.13■■□□□ 1.13
CSPG5O95196 TK2-204ENST00000525974 1178 ntTSL 2 BASIC22.13■■□□□ 1.13
CSPG5O95196 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC22.13■■□□□ 1.13
CSPG5O95196 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CSPG5O95196 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CSPG5O95196 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC22.13■■□□□ 1.13
CSPG5O95196 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CSPG5O95196 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC22.13■■□□□ 1.13
CSPG5O95196 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
CSPG5O95196 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC22.12■■□□□ 1.13
CSPG5O95196 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CSPG5O95196 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CSPG5O95196 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CSPG5O95196 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC22.12■■□□□ 1.13
CSPG5O95196 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC22.12■■□□□ 1.13
CSPG5O95196 AC080038.3-201ENST00000623346 1952 ntBASIC22.12■■□□□ 1.13
CSPG5O95196 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
CSPG5O95196 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
CSPG5O95196 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC22.12■■□□□ 1.13
CSPG5O95196 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CSPG5O95196 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.11■■□□□ 1.13
CSPG5O95196 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
CSPG5O95196 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC22.11■■□□□ 1.13
CSPG5O95196 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC22.11■■□□□ 1.13
CSPG5O95196 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
CSPG5O95196 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CSPG5O95196 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
CSPG5O95196 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
CSPG5O95196 TSPY7P-201ENST00000431358 1114 ntBASIC22.11■■□□□ 1.13
CSPG5O95196 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC22.11■■□□□ 1.13
CSPG5O95196 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
CSPG5O95196 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC22.11■■□□□ 1.13
CSPG5O95196 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC22.11■■□□□ 1.13
CSPG5O95196 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC22.11■■□□□ 1.13
CSPG5O95196 REXO2-216ENST00000544196 452 ntTSL 3 BASIC22.11■■□□□ 1.13
CSPG5O95196 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC22.11■■□□□ 1.13
CSPG5O95196 REXO1L12P-201ENST00000622156 912 ntBASIC22.11■■□□□ 1.13
CSPG5O95196 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
CSPG5O95196 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CSPG5O95196 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
CSPG5O95196 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CSPG5O95196 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC22.11■■□□□ 1.13
CSPG5O95196 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CSPG5O95196 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC22.1■■□□□ 1.13
CSPG5O95196 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC22.1■■□□□ 1.13
CSPG5O95196 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CSPG5O95196 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CSPG5O95196 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CSPG5O95196 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CSPG5O95196 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CSPG5O95196 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
CSPG5O95196 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CSPG5O95196 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CSPG5O95196 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC22.1■■□□□ 1.13
CSPG5O95196 AC092053.2-201ENST00000640557 1818 ntBASIC22.1■■□□□ 1.13
CSPG5O95196 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC22.1■■□□□ 1.13
CSPG5O95196 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
CSPG5O95196 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
CSPG5O95196 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
CSPG5O95196 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
CSPG5O95196 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC22.09■■□□□ 1.13
CSPG5O95196 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CSPG5O95196 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CSPG5O95196 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CSPG5O95196 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms