Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.73■■□□□ 1.07
BEST1O76090 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.73■■□□□ 1.07
BEST1O76090 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.73■■□□□ 1.07
BEST1O76090 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.73■■□□□ 1.07
BEST1O76090 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
BEST1O76090 AC011484.1-201ENST00000377652 1995 ntBASIC21.72■■□□□ 1.07
BEST1O76090 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
BEST1O76090 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
BEST1O76090 AL137060.1-201ENST00000618151 2648 ntBASIC21.72■■□□□ 1.07
BEST1O76090 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
BEST1O76090 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.72■■□□□ 1.07
BEST1O76090 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.72■■□□□ 1.07
BEST1O76090 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.72■■□□□ 1.07
BEST1O76090 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.72■■□□□ 1.07
BEST1O76090 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.72■■□□□ 1.07
BEST1O76090 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
BEST1O76090 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
BEST1O76090 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
BEST1O76090 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.72■■□□□ 1.07
BEST1O76090 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
BEST1O76090 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
BEST1O76090 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.72■■□□□ 1.07
BEST1O76090 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
BEST1O76090 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
BEST1O76090 KRT17P1-201ENST00000399211 1546 ntBASIC21.71■■□□□ 1.07
BEST1O76090 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
BEST1O76090 PLK5-205ENST00000642079 1969 ntBASIC21.71■■□□□ 1.07
BEST1O76090 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
BEST1O76090 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
BEST1O76090 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
BEST1O76090 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
BEST1O76090 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.71■■□□□ 1.07
BEST1O76090 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.71■■□□□ 1.07
BEST1O76090 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.71■■□□□ 1.07
BEST1O76090 CYP21A1P-202ENST00000354927 1481 ntBASIC21.71■■□□□ 1.07
BEST1O76090 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
BEST1O76090 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.7■■□□□ 1.06
BEST1O76090 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
BEST1O76090 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
BEST1O76090 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
BEST1O76090 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
BEST1O76090 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.7■■□□□ 1.06
BEST1O76090 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.7■■□□□ 1.06
BEST1O76090 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.7■■□□□ 1.06
BEST1O76090 CYP2T3P-201ENST00000601990 817 ntBASIC21.7■■□□□ 1.06
BEST1O76090 AC100791.3-201ENST00000617619 330 ntBASIC21.7■■□□□ 1.06
BEST1O76090 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
BEST1O76090 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
BEST1O76090 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
BEST1O76090 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.69■■□□□ 1.06
BEST1O76090 AC121338.2-201ENST00000622535 1744 ntBASIC21.69■■□□□ 1.06
BEST1O76090 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
BEST1O76090 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
BEST1O76090 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.69■■□□□ 1.06
BEST1O76090 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.69■■□□□ 1.06
BEST1O76090 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
BEST1O76090 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.69■■□□□ 1.06
BEST1O76090 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.69■■□□□ 1.06
BEST1O76090 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.69■■□□□ 1.06
BEST1O76090 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.69■■□□□ 1.06
BEST1O76090 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.69■■□□□ 1.06
BEST1O76090 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.69■■□□□ 1.06
BEST1O76090 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.69■■□□□ 1.06
BEST1O76090 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
BEST1O76090 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
BEST1O76090 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.68■■□□□ 1.06
BEST1O76090 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
BEST1O76090 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
BEST1O76090 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
BEST1O76090 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
BEST1O76090 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
BEST1O76090 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
BEST1O76090 MCRIP2P1-201ENST00000394346 511 ntBASIC21.68■■□□□ 1.06
BEST1O76090 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
BEST1O76090 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.68■■□□□ 1.06
BEST1O76090 AC069152.1-201ENST00000438030 544 ntBASIC21.68■■□□□ 1.06
BEST1O76090 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.68■■□□□ 1.06
BEST1O76090 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.68■■□□□ 1.06
BEST1O76090 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.68■■□□□ 1.06
BEST1O76090 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
BEST1O76090 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
BEST1O76090 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
BEST1O76090 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
BEST1O76090 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.68■■□□□ 1.06
BEST1O76090 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.68■■□□□ 1.06
BEST1O76090 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
BEST1O76090 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.68■■□□□ 1.06
BEST1O76090 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
BEST1O76090 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.67■■□□□ 1.06
BEST1O76090 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.67■■□□□ 1.06
BEST1O76090 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
BEST1O76090 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
BEST1O76090 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
BEST1O76090 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
BEST1O76090 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.67■■□□□ 1.06
BEST1O76090 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.67■■□□□ 1.06
BEST1O76090 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.67■■□□□ 1.06
BEST1O76090 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
BEST1O76090 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.67■■□□□ 1.06
BEST1O76090 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms