Protein–RNA interactions for Protein: O75871

CEACAM4, Carcinoembryonic antigen-related cell adhesion molecule 4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM4O75871 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CEACAM4O75871 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.87■□□□□ 0.61
CEACAM4O75871 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CEACAM4O75871 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.87■□□□□ 0.61
CEACAM4O75871 AC233702.5-201ENST00000584107 538 ntBASIC18.87■□□□□ 0.61
CEACAM4O75871 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.87■□□□□ 0.61
CEACAM4O75871 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CEACAM4O75871 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CEACAM4O75871 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CEACAM4O75871 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CEACAM4O75871 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CEACAM4O75871 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CEACAM4O75871 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CEACAM4O75871 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CEACAM4O75871 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.86■□□□□ 0.61
CEACAM4O75871 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.86■□□□□ 0.61
CEACAM4O75871 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CEACAM4O75871 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.86■□□□□ 0.61
CEACAM4O75871 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.86■□□□□ 0.61
CEACAM4O75871 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.86■□□□□ 0.61
CEACAM4O75871 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CEACAM4O75871 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CEACAM4O75871 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CEACAM4O75871 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.86■□□□□ 0.61
CEACAM4O75871 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CEACAM4O75871 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CEACAM4O75871 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.86■□□□□ 0.61
CEACAM4O75871 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CEACAM4O75871 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.86■□□□□ 0.61
CEACAM4O75871 AC005829.2-201ENST00000571422 1056 ntBASIC18.86■□□□□ 0.61
CEACAM4O75871 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.86■□□□□ 0.61
CEACAM4O75871 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CEACAM4O75871 AC120498.8-201ENST00000614275 531 ntBASIC18.86■□□□□ 0.61
CEACAM4O75871 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CEACAM4O75871 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CEACAM4O75871 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CEACAM4O75871 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CEACAM4O75871 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CEACAM4O75871 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CEACAM4O75871 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CEACAM4O75871 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CEACAM4O75871 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.85■□□□□ 0.61
CEACAM4O75871 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CEACAM4O75871 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CEACAM4O75871 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CEACAM4O75871 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CEACAM4O75871 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CEACAM4O75871 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CEACAM4O75871 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.85■□□□□ 0.61
CEACAM4O75871 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CEACAM4O75871 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CEACAM4O75871 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CEACAM4O75871 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.85■□□□□ 0.61
CEACAM4O75871 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CEACAM4O75871 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.85■□□□□ 0.61
CEACAM4O75871 AC124016.1-201ENST00000609552 612 ntBASIC18.85■□□□□ 0.61
CEACAM4O75871 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CEACAM4O75871 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CEACAM4O75871 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CEACAM4O75871 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.85■□□□□ 0.61
CEACAM4O75871 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.85■□□□□ 0.61
CEACAM4O75871 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.84■□□□□ 0.61
CEACAM4O75871 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CEACAM4O75871 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CEACAM4O75871 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CEACAM4O75871 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CEACAM4O75871 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CEACAM4O75871 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.84■□□□□ 0.61
CEACAM4O75871 RPS2P55-201ENST00000397318 883 ntBASIC18.84■□□□□ 0.61
CEACAM4O75871 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CEACAM4O75871 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.84■□□□□ 0.61
CEACAM4O75871 AC107956.1-201ENST00000494359 873 ntBASIC18.84■□□□□ 0.61
CEACAM4O75871 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.84■□□□□ 0.61
CEACAM4O75871 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.84■□□□□ 0.61
CEACAM4O75871 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
CEACAM4O75871 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.84■□□□□ 0.61
CEACAM4O75871 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.84■□□□□ 0.61
CEACAM4O75871 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CEACAM4O75871 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CEACAM4O75871 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.84■□□□□ 0.61
CEACAM4O75871 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CEACAM4O75871 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CEACAM4O75871 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CEACAM4O75871 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CEACAM4O75871 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CEACAM4O75871 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CEACAM4O75871 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CEACAM4O75871 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.83■□□□□ 0.6
CEACAM4O75871 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CEACAM4O75871 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CEACAM4O75871 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.83■□□□□ 0.6
CEACAM4O75871 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
CEACAM4O75871 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CEACAM4O75871 REXO1L12P-201ENST00000622156 912 ntBASIC18.83■□□□□ 0.6
CEACAM4O75871 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CEACAM4O75871 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CEACAM4O75871 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.83■□□□□ 0.6
CEACAM4O75871 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CEACAM4O75871 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CEACAM4O75871 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms