Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CTNSO60931 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
CTNSO60931 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.35■□□□□ 0.69
CTNSO60931 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTNSO60931 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTNSO60931 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.35■□□□□ 0.69
CTNSO60931 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.35■□□□□ 0.69
CTNSO60931 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.35■□□□□ 0.69
CTNSO60931 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTNSO60931 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CTNSO60931 MIR663A-201ENST00000385250 93 ntBASIC19.35■□□□□ 0.69
CTNSO60931 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.35■□□□□ 0.69
CTNSO60931 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.35■□□□□ 0.69
CTNSO60931 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTNSO60931 AC133552.2-202ENST00000575694 574 ntBASIC19.35■□□□□ 0.69
CTNSO60931 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTNSO60931 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTNSO60931 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTNSO60931 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.35■□□□□ 0.69
CTNSO60931 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CTNSO60931 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
CTNSO60931 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTNSO60931 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTNSO60931 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CTNSO60931 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
CTNSO60931 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.34■□□□□ 0.69
CTNSO60931 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTNSO60931 AL050303.2-201ENST00000619798 666 ntBASIC19.34■□□□□ 0.69
CTNSO60931 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.34■□□□□ 0.69
CTNSO60931 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CTNSO60931 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CTNSO60931 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CTNSO60931 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
CTNSO60931 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTNSO60931 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTNSO60931 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CTNSO60931 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CTNSO60931 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CTNSO60931 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CTNSO60931 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CTNSO60931 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CTNSO60931 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CTNSO60931 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.33■□□□□ 0.68
CTNSO60931 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CTNSO60931 AL512625.2-201ENST00000417533 625 ntBASIC19.33■□□□□ 0.68
CTNSO60931 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.33■□□□□ 0.68
CTNSO60931 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.33■□□□□ 0.68
CTNSO60931 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CTNSO60931 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.33■□□□□ 0.68
CTNSO60931 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.33■□□□□ 0.68
CTNSO60931 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
CTNSO60931 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.33■□□□□ 0.68
CTNSO60931 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CTNSO60931 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CTNSO60931 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CTNSO60931 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CTNSO60931 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CTNSO60931 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CTNSO60931 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTNSO60931 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
CTNSO60931 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CTNSO60931 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CTNSO60931 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTNSO60931 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTNSO60931 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTNSO60931 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTNSO60931 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CTNSO60931 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTNSO60931 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CTNSO60931 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.32■□□□□ 0.68
CTNSO60931 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.32■□□□□ 0.68
CTNSO60931 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CTNSO60931 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CTNSO60931 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.32■□□□□ 0.68
CTNSO60931 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.32■□□□□ 0.68
CTNSO60931 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.32■□□□□ 0.68
CTNSO60931 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.32■□□□□ 0.68
CTNSO60931 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTNSO60931 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.32■□□□□ 0.68
CTNSO60931 PLK5-205ENST00000642079 1969 ntBASIC19.32■□□□□ 0.68
CTNSO60931 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CTNSO60931 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.32■□□□□ 0.68
CTNSO60931 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTNSO60931 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CTNSO60931 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTNSO60931 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CTNSO60931 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTNSO60931 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CTNSO60931 AL137060.1-201ENST00000618151 2648 ntBASIC19.31■□□□□ 0.68
CTNSO60931 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CTNSO60931 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
CTNSO60931 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTNSO60931 NCF1B-203ENST00000435988 1254 ntBASIC19.31■□□□□ 0.68
CTNSO60931 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.31■□□□□ 0.68
CTNSO60931 AF201337.1-201ENST00000520239 748 ntBASIC19.31■□□□□ 0.68
CTNSO60931 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
CTNSO60931 AC100791.3-201ENST00000617619 330 ntBASIC19.31■□□□□ 0.68
CTNSO60931 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTNSO60931 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.31■□□□□ 0.68
CTNSO60931 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms