Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RRP8O43159 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
RRP8O43159 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
RRP8O43159 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RRP8O43159 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
RRP8O43159 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.45■□□□□ 0.7
RRP8O43159 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RRP8O43159 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.45■□□□□ 0.7
RRP8O43159 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
RRP8O43159 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RRP8O43159 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RRP8O43159 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.44■□□□□ 0.7
RRP8O43159 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RRP8O43159 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RRP8O43159 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.44■□□□□ 0.7
RRP8O43159 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RRP8O43159 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RRP8O43159 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RRP8O43159 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.44■□□□□ 0.7
RRP8O43159 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.44■□□□□ 0.7
RRP8O43159 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.44■□□□□ 0.7
RRP8O43159 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RRP8O43159 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.44■□□□□ 0.7
RRP8O43159 AL355075.4-201ENST00000554988 638 ntBASIC19.44■□□□□ 0.7
RRP8O43159 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RRP8O43159 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.44■□□□□ 0.7
RRP8O43159 AC113410.3-201ENST00000623366 203 ntBASIC19.44■□□□□ 0.7
RRP8O43159 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RRP8O43159 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
RRP8O43159 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RRP8O43159 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RRP8O43159 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RRP8O43159 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.44■□□□□ 0.7
RRP8O43159 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RRP8O43159 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
RRP8O43159 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RRP8O43159 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
RRP8O43159 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.43■□□□□ 0.7
RRP8O43159 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RRP8O43159 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RRP8O43159 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.43■□□□□ 0.7
RRP8O43159 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.43■□□□□ 0.7
RRP8O43159 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RRP8O43159 TSPY15P-201ENST00000457163 923 ntBASIC19.43■□□□□ 0.7
RRP8O43159 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RRP8O43159 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.43■□□□□ 0.7
RRP8O43159 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RRP8O43159 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RRP8O43159 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.43■□□□□ 0.7
RRP8O43159 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
RRP8O43159 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RRP8O43159 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RRP8O43159 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RRP8O43159 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.43■□□□□ 0.7
RRP8O43159 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RRP8O43159 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.43■□□□□ 0.7
RRP8O43159 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RRP8O43159 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RRP8O43159 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RRP8O43159 AC092068.2-201ENST00000590491 1708 ntBASIC19.42■□□□□ 0.7
RRP8O43159 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RRP8O43159 ANOS2P-203ENST00000472227 1816 ntBASIC19.42■□□□□ 0.7
RRP8O43159 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RRP8O43159 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
RRP8O43159 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
RRP8O43159 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.42■□□□□ 0.7
RRP8O43159 RARRES2P10-201ENST00000564312 460 ntBASIC19.42■□□□□ 0.7
RRP8O43159 RN7SL850P-201ENST00000579959 291 ntBASIC19.42■□□□□ 0.7
RRP8O43159 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.42■□□□□ 0.7
RRP8O43159 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.42■□□□□ 0.7
RRP8O43159 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RRP8O43159 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RRP8O43159 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
RRP8O43159 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RRP8O43159 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RRP8O43159 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RRP8O43159 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RRP8O43159 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RRP8O43159 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RRP8O43159 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RRP8O43159 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RRP8O43159 KRASP1-201ENST00000407852 552 ntBASIC19.41■□□□□ 0.7
RRP8O43159 AC007322.3-201ENST00000426526 701 ntBASIC19.41■□□□□ 0.7
RRP8O43159 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.41■□□□□ 0.7
RRP8O43159 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.41■□□□□ 0.7
RRP8O43159 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.41■□□□□ 0.7
RRP8O43159 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
RRP8O43159 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
RRP8O43159 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RRP8O43159 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RRP8O43159 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RRP8O43159 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
RRP8O43159 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RRP8O43159 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
RRP8O43159 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RRP8O43159 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RRP8O43159 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.4■□□□□ 0.7
RRP8O43159 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.4■□□□□ 0.7
RRP8O43159 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RRP8O43159 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms