Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDH17O14917 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.66■□□□□ 0.74
PCDH17O14917 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDH17O14917 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDH17O14917 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH17O14917 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDH17O14917 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.66■□□□□ 0.74
PCDH17O14917 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PCDH17O14917 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH17O14917 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH17O14917 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH17O14917 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH17O14917 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
PCDH17O14917 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.65■□□□□ 0.74
PCDH17O14917 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDH17O14917 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
PCDH17O14917 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH17O14917 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH17O14917 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH17O14917 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.65■□□□□ 0.74
PCDH17O14917 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH17O14917 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH17O14917 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDH17O14917 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
PCDH17O14917 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH17O14917 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDH17O14917 AL109923.1-201ENST00000618799 583 ntBASIC19.65■□□□□ 0.74
PCDH17O14917 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
PCDH17O14917 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH17O14917 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH17O14917 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH17O14917 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH17O14917 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH17O14917 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PCDH17O14917 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PCDH17O14917 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PCDH17O14917 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
PCDH17O14917 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDH17O14917 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDH17O14917 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDH17O14917 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDH17O14917 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.64■□□□□ 0.73
PCDH17O14917 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.64■□□□□ 0.73
PCDH17O14917 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
PCDH17O14917 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDH17O14917 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDH17O14917 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDH17O14917 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDH17O14917 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDH17O14917 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.64■□□□□ 0.73
PCDH17O14917 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDH17O14917 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDH17O14917 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
PCDH17O14917 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PCDH17O14917 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDH17O14917 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDH17O14917 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDH17O14917 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDH17O14917 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDH17O14917 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDH17O14917 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDH17O14917 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.63■□□□□ 0.73
PCDH17O14917 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDH17O14917 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDH17O14917 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
PCDH17O14917 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.62■□□□□ 0.73
PCDH17O14917 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.62■□□□□ 0.73
PCDH17O14917 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDH17O14917 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDH17O14917 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
PCDH17O14917 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.62■□□□□ 0.73
PCDH17O14917 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDH17O14917 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.62■□□□□ 0.73
PCDH17O14917 OR10C1-204ENST00000622521 1039 ntBASIC19.62■□□□□ 0.73
PCDH17O14917 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDH17O14917 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDH17O14917 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDH17O14917 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDH17O14917 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDH17O14917 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDH17O14917 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDH17O14917 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.61■□□□□ 0.73
PCDH17O14917 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDH17O14917 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDH17O14917 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDH17O14917 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.61■□□□□ 0.73
PCDH17O14917 AC083906.2-201ENST00000511578 360 ntBASIC19.61■□□□□ 0.73
PCDH17O14917 AF201337.1-201ENST00000520239 748 ntBASIC19.61■□□□□ 0.73
PCDH17O14917 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.61■□□□□ 0.73
PCDH17O14917 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDH17O14917 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDH17O14917 AC069236.1-201ENST00000604339 616 ntBASIC19.61■□□□□ 0.73
PCDH17O14917 AC008694.1-202ENST00000636953 945 ntBASIC19.61■□□□□ 0.73
PCDH17O14917 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDH17O14917 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDH17O14917 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
PCDH17O14917 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDH17O14917 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
PCDH17O14917 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDH17O14917 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms