Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.55■□□□□ 0.88
H3BM21 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
H3BM21 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
H3BM21 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.54■□□□□ 0.88
H3BM21 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
H3BM21 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
H3BM21 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
H3BM21 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
H3BM21 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
H3BM21 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.54■□□□□ 0.88
H3BM21 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
H3BM21 AC097658.1-201ENST00000475555 843 ntBASIC20.54■□□□□ 0.88
H3BM21 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.54■□□□□ 0.88
H3BM21 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.54■□□□□ 0.88
H3BM21 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
H3BM21 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
H3BM21 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
H3BM21 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
H3BM21 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.54■□□□□ 0.88
H3BM21 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
H3BM21 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
H3BM21 AC010980.2-201ENST00000587099 1412 ntBASIC20.53■□□□□ 0.88
H3BM21 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
H3BM21 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
H3BM21 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
H3BM21 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
H3BM21 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.53■□□□□ 0.88
H3BM21 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.53■□□□□ 0.88
H3BM21 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.53■□□□□ 0.88
H3BM21 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.53■□□□□ 0.88
H3BM21 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
H3BM21 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
H3BM21 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
H3BM21 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
H3BM21 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
H3BM21 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.53■□□□□ 0.88
H3BM21 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.53■□□□□ 0.88
H3BM21 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.53■□□□□ 0.88
H3BM21 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.53■□□□□ 0.88
H3BM21 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
H3BM21 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
H3BM21 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
H3BM21 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
H3BM21 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
H3BM21 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
H3BM21 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
H3BM21 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
H3BM21 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
H3BM21 CDV3P1-201ENST00000471403 739 ntBASIC20.52■□□□□ 0.88
H3BM21 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.52■□□□□ 0.88
H3BM21 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
H3BM21 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.52■□□□□ 0.88
H3BM21 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
H3BM21 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.52■□□□□ 0.88
H3BM21 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.52■□□□□ 0.87
H3BM21 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
H3BM21 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
H3BM21 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
H3BM21 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
H3BM21 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
H3BM21 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
H3BM21 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
H3BM21 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
H3BM21 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
H3BM21 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
H3BM21 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
H3BM21 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
H3BM21 POU5F1P3-201ENST00000428824 1078 ntBASIC20.5■□□□□ 0.87
H3BM21 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.5■□□□□ 0.87
H3BM21 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.5■□□□□ 0.87
H3BM21 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.5■□□□□ 0.87
H3BM21 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.5■□□□□ 0.87
H3BM21 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
H3BM21 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.5■□□□□ 0.87
H3BM21 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
H3BM21 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
H3BM21 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
H3BM21 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
H3BM21 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.5■□□□□ 0.87
H3BM21 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
H3BM21 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
H3BM21 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
H3BM21 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
H3BM21 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
H3BM21 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
H3BM21 FAM21FP-204ENST00000608637 956 ntBASIC20.49■□□□□ 0.87
H3BM21 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.49■□□□□ 0.87
H3BM21 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.49■□□□□ 0.87
H3BM21 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.49■□□□□ 0.87
H3BM21 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.49■□□□□ 0.87
H3BM21 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.49■□□□□ 0.87
H3BM21 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
H3BM21 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.49■□□□□ 0.87
H3BM21 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.49■□□□□ 0.87
H3BM21 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.48■□□□□ 0.87
H3BM21 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
H3BM21 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
H3BM21 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
H3BM21 LSM12P1-201ENST00000411836 588 ntBASIC20.48■□□□□ 0.87
H3BM21 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms