Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
C4orf47A7E2U8 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
C4orf47A7E2U8 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
C4orf47A7E2U8 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
C4orf47A7E2U8 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.26■□□□□ 0.83
C4orf47A7E2U8 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
C4orf47A7E2U8 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
C4orf47A7E2U8 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.26■□□□□ 0.83
C4orf47A7E2U8 TMPOP1-202ENST00000424642 1267 ntBASIC20.26■□□□□ 0.83
C4orf47A7E2U8 AC133681.1-201ENST00000465482 601 ntBASIC20.26■□□□□ 0.83
C4orf47A7E2U8 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
C4orf47A7E2U8 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
C4orf47A7E2U8 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.25■□□□□ 0.83
C4orf47A7E2U8 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
C4orf47A7E2U8 ARMC10P1-201ENST00000313754 855 ntBASIC20.25■□□□□ 0.83
C4orf47A7E2U8 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
C4orf47A7E2U8 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
C4orf47A7E2U8 AC239809.2-201ENST00000415381 517 ntBASIC20.25■□□□□ 0.83
C4orf47A7E2U8 KRT18P35-201ENST00000510488 1269 ntBASIC20.25■□□□□ 0.83
C4orf47A7E2U8 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.25■□□□□ 0.83
C4orf47A7E2U8 AL355075.4-201ENST00000554988 638 ntBASIC20.25■□□□□ 0.83
C4orf47A7E2U8 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.25■□□□□ 0.83
C4orf47A7E2U8 AC113410.3-201ENST00000623366 203 ntBASIC20.25■□□□□ 0.83
C4orf47A7E2U8 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
C4orf47A7E2U8 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.25■□□□□ 0.83
C4orf47A7E2U8 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.25■□□□□ 0.83
C4orf47A7E2U8 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
C4orf47A7E2U8 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.25■□□□□ 0.83
C4orf47A7E2U8 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
C4orf47A7E2U8 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
C4orf47A7E2U8 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
C4orf47A7E2U8 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
C4orf47A7E2U8 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
C4orf47A7E2U8 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
C4orf47A7E2U8 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.24■□□□□ 0.83
C4orf47A7E2U8 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
C4orf47A7E2U8 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.24■□□□□ 0.83
C4orf47A7E2U8 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
C4orf47A7E2U8 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
C4orf47A7E2U8 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
C4orf47A7E2U8 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
C4orf47A7E2U8 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.24■□□□□ 0.83
C4orf47A7E2U8 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
C4orf47A7E2U8 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.24■□□□□ 0.83
C4orf47A7E2U8 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.24■□□□□ 0.83
C4orf47A7E2U8 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
C4orf47A7E2U8 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
C4orf47A7E2U8 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
C4orf47A7E2U8 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
C4orf47A7E2U8 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
C4orf47A7E2U8 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
C4orf47A7E2U8 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
C4orf47A7E2U8 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
C4orf47A7E2U8 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
C4orf47A7E2U8 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
C4orf47A7E2U8 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
C4orf47A7E2U8 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.23■□□□□ 0.83
C4orf47A7E2U8 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
C4orf47A7E2U8 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
C4orf47A7E2U8 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
C4orf47A7E2U8 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.23■□□□□ 0.83
C4orf47A7E2U8 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
C4orf47A7E2U8 AC110285.5-201ENST00000611501 352 ntBASIC20.23■□□□□ 0.83
C4orf47A7E2U8 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.23■□□□□ 0.83
C4orf47A7E2U8 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
C4orf47A7E2U8 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
C4orf47A7E2U8 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
C4orf47A7E2U8 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
C4orf47A7E2U8 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
C4orf47A7E2U8 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.23■□□□□ 0.83
C4orf47A7E2U8 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
C4orf47A7E2U8 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
C4orf47A7E2U8 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
C4orf47A7E2U8 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
C4orf47A7E2U8 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.22■□□□□ 0.83
C4orf47A7E2U8 AC003102.1-202ENST00000563394 1796 ntBASIC20.22■□□□□ 0.83
C4orf47A7E2U8 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
C4orf47A7E2U8 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
C4orf47A7E2U8 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
C4orf47A7E2U8 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.22■□□□□ 0.83
C4orf47A7E2U8 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
C4orf47A7E2U8 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.22■□□□□ 0.83
C4orf47A7E2U8 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.22■□□□□ 0.83
C4orf47A7E2U8 RN7SL850P-201ENST00000579959 291 ntBASIC20.22■□□□□ 0.83
C4orf47A7E2U8 CD177P1-201ENST00000606252 935 ntBASIC20.22■□□□□ 0.83
C4orf47A7E2U8 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
C4orf47A7E2U8 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
C4orf47A7E2U8 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
C4orf47A7E2U8 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
C4orf47A7E2U8 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
C4orf47A7E2U8 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
C4orf47A7E2U8 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
C4orf47A7E2U8 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
C4orf47A7E2U8 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.21■□□□□ 0.83
C4orf47A7E2U8 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
C4orf47A7E2U8 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.21■□□□□ 0.83
C4orf47A7E2U8 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
C4orf47A7E2U8 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.21■□□□□ 0.83
C4orf47A7E2U8 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.21■□□□□ 0.83
C4orf47A7E2U8 PRKY-204ENST00000533551 1019 ntBASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms