Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 AC003102.1-202ENST00000563394 1796 ntBASIC19.91■□□□□ 0.78
CNOT1A5YKK6 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNOT1A5YKK6 AL355355.2-201ENST00000442321 338 ntBASIC19.91■□□□□ 0.78
CNOT1A5YKK6 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.91■□□□□ 0.78
CNOT1A5YKK6 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.91■□□□□ 0.78
CNOT1A5YKK6 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.91■□□□□ 0.78
CNOT1A5YKK6 AC092068.2-201ENST00000590491 1708 ntBASIC19.91■□□□□ 0.78
CNOT1A5YKK6 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CNOT1A5YKK6 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNOT1A5YKK6 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CNOT1A5YKK6 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNOT1A5YKK6 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.91■□□□□ 0.78
CNOT1A5YKK6 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNOT1A5YKK6 MMP23A-201ENST00000234610 1017 ntBASIC19.91■□□□□ 0.78
CNOT1A5YKK6 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CNOT1A5YKK6 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CNOT1A5YKK6 DUX4L26-201ENST00000489078 1255 ntBASIC19.91■□□□□ 0.78
CNOT1A5YKK6 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.9■□□□□ 0.78
CNOT1A5YKK6 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNOT1A5YKK6 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.9■□□□□ 0.78
CNOT1A5YKK6 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CNOT1A5YKK6 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CNOT1A5YKK6 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.9■□□□□ 0.78
CNOT1A5YKK6 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNOT1A5YKK6 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNOT1A5YKK6 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNOT1A5YKK6 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CNOT1A5YKK6 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNOT1A5YKK6 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNOT1A5YKK6 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.9■□□□□ 0.78
CNOT1A5YKK6 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.9■□□□□ 0.78
CNOT1A5YKK6 AC005363.2-201ENST00000618631 242 ntBASIC19.9■□□□□ 0.78
CNOT1A5YKK6 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNOT1A5YKK6 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CNOT1A5YKK6 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.89■□□□□ 0.78
CNOT1A5YKK6 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.89■□□□□ 0.78
CNOT1A5YKK6 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNOT1A5YKK6 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CNOT1A5YKK6 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNOT1A5YKK6 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CNOT1A5YKK6 TERF1P1-201ENST00000311003 1181 ntBASIC19.89■□□□□ 0.77
CNOT1A5YKK6 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CNOT1A5YKK6 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNOT1A5YKK6 WWOX-216ENST00000569818 525 ntBASIC19.89■□□□□ 0.77
CNOT1A5YKK6 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CNOT1A5YKK6 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CNOT1A5YKK6 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.89■□□□□ 0.77
CNOT1A5YKK6 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNOT1A5YKK6 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CNOT1A5YKK6 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNOT1A5YKK6 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CNOT1A5YKK6 AL390955.1-201ENST00000428694 934 ntBASIC19.88■□□□□ 0.77
CNOT1A5YKK6 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.88■□□□□ 0.77
CNOT1A5YKK6 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.88■□□□□ 0.77
CNOT1A5YKK6 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.88■□□□□ 0.77
CNOT1A5YKK6 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.88■□□□□ 0.77
CNOT1A5YKK6 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.88■□□□□ 0.77
CNOT1A5YKK6 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.88■□□□□ 0.77
CNOT1A5YKK6 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CNOT1A5YKK6 C11orf96-202ENST00000528572 1834 ntBASIC19.88■□□□□ 0.77
CNOT1A5YKK6 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CNOT1A5YKK6 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.88■□□□□ 0.77
CNOT1A5YKK6 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CNOT1A5YKK6 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNOT1A5YKK6 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
CNOT1A5YKK6 AL031963.3-201ENST00000606441 850 ntBASIC19.88■□□□□ 0.77
CNOT1A5YKK6 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNOT1A5YKK6 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNOT1A5YKK6 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNOT1A5YKK6 LINC01568-207ENST00000641790 1380 ntBASIC19.88■□□□□ 0.77
CNOT1A5YKK6 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CNOT1A5YKK6 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CNOT1A5YKK6 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CNOT1A5YKK6 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.87■□□□□ 0.77
CNOT1A5YKK6 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNOT1A5YKK6 AF186192.3-201ENST00000583427 947 ntBASIC19.87■□□□□ 0.77
CNOT1A5YKK6 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CNOT1A5YKK6 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNOT1A5YKK6 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CNOT1A5YKK6 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CNOT1A5YKK6 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNOT1A5YKK6 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNOT1A5YKK6 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CNOT1A5YKK6 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CNOT1A5YKK6 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
CNOT1A5YKK6 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.87■□□□□ 0.77
CNOT1A5YKK6 DUSP5P1-201ENST00000441325 1139 ntBASIC19.87■□□□□ 0.77
CNOT1A5YKK6 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.87■□□□□ 0.77
CNOT1A5YKK6 AC073195.1-201ENST00000607241 877 ntBASIC19.87■□□□□ 0.77
CNOT1A5YKK6 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNOT1A5YKK6 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNOT1A5YKK6 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNOT1A5YKK6 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNOT1A5YKK6 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNOT1A5YKK6 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.86■□□□□ 0.77
CNOT1A5YKK6 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNOT1A5YKK6 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNOT1A5YKK6 AC079598.2-202ENST00000546624 1451 ntBASIC19.86■□□□□ 0.77
CNOT1A5YKK6 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.86■□□□□ 0.77
CNOT1A5YKK6 RBM17P1-201ENST00000453646 1190 ntBASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms