Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SSC5DA1L4H1 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SSC5DA1L4H1 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SSC5DA1L4H1 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SSC5DA1L4H1 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SSC5DA1L4H1 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC24.31■■□□□ 1.48
SSC5DA1L4H1 THEM4-205ENST00000489410 643 ntTSL 2 BASIC24.31■■□□□ 1.48
SSC5DA1L4H1 AL355075.4-201ENST00000554988 638 ntBASIC24.31■■□□□ 1.48
SSC5DA1L4H1 AC012306.2-201ENST00000609350 630 ntBASIC24.31■■□□□ 1.48
SSC5DA1L4H1 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SSC5DA1L4H1 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC24.31■■□□□ 1.48
SSC5DA1L4H1 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
SSC5DA1L4H1 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
SSC5DA1L4H1 GGT1-206ENST00000404223 952 ntTSL 2 BASIC24.3■■□□□ 1.48
SSC5DA1L4H1 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC24.3■■□□□ 1.48
SSC5DA1L4H1 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SSC5DA1L4H1 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SSC5DA1L4H1 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SSC5DA1L4H1 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SSC5DA1L4H1 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SSC5DA1L4H1 AC116050.2-201ENST00000612102 1779 ntBASIC24.3■■□□□ 1.48
SSC5DA1L4H1 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC24.3■■□□□ 1.48
SSC5DA1L4H1 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC24.3■■□□□ 1.48
SSC5DA1L4H1 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SSC5DA1L4H1 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC24.3■■□□□ 1.48
SSC5DA1L4H1 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC24.3■■□□□ 1.48
SSC5DA1L4H1 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC24.29■■□□□ 1.48
SSC5DA1L4H1 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SSC5DA1L4H1 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
SSC5DA1L4H1 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC24.29■■□□□ 1.48
SSC5DA1L4H1 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
SSC5DA1L4H1 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SSC5DA1L4H1 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
SSC5DA1L4H1 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC24.29■■□□□ 1.48
SSC5DA1L4H1 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SSC5DA1L4H1 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC24.29■■□□□ 1.48
SSC5DA1L4H1 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
SSC5DA1L4H1 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC24.29■■□□□ 1.48
SSC5DA1L4H1 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SSC5DA1L4H1 RCN1P1-201ENST00000400413 996 ntBASIC24.29■■□□□ 1.48
SSC5DA1L4H1 KRASP1-201ENST00000407852 552 ntBASIC24.29■■□□□ 1.48
SSC5DA1L4H1 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC24.29■■□□□ 1.48
SSC5DA1L4H1 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC24.29■■□□□ 1.48
SSC5DA1L4H1 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
SSC5DA1L4H1 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SSC5DA1L4H1 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
SSC5DA1L4H1 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC24.28■■□□□ 1.48
SSC5DA1L4H1 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
SSC5DA1L4H1 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC24.28■■□□□ 1.48
SSC5DA1L4H1 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC24.28■■□□□ 1.48
SSC5DA1L4H1 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC24.28■■□□□ 1.48
SSC5DA1L4H1 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC24.28■■□□□ 1.48
SSC5DA1L4H1 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SSC5DA1L4H1 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC24.28■■□□□ 1.48
SSC5DA1L4H1 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC24.28■■□□□ 1.48
SSC5DA1L4H1 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
SSC5DA1L4H1 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SSC5DA1L4H1 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
SSC5DA1L4H1 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SSC5DA1L4H1 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SSC5DA1L4H1 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SSC5DA1L4H1 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
SSC5DA1L4H1 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC24.27■■□□□ 1.48
SSC5DA1L4H1 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SSC5DA1L4H1 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SSC5DA1L4H1 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC24.27■■□□□ 1.48
SSC5DA1L4H1 AC005829.2-201ENST00000571422 1056 ntBASIC24.27■■□□□ 1.48
SSC5DA1L4H1 SNX21-213ENST00000614929 587 ntTSL 5 BASIC24.27■■□□□ 1.48
SSC5DA1L4H1 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC24.27■■□□□ 1.48
SSC5DA1L4H1 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
SSC5DA1L4H1 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
SSC5DA1L4H1 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC24.26■■□□□ 1.47
SSC5DA1L4H1 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
SSC5DA1L4H1 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC24.26■■□□□ 1.47
SSC5DA1L4H1 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SSC5DA1L4H1 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC24.26■■□□□ 1.47
SSC5DA1L4H1 MIR4785-201ENST00000585005 73 ntBASIC24.26■■□□□ 1.47
SSC5DA1L4H1 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
SSC5DA1L4H1 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SSC5DA1L4H1 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SSC5DA1L4H1 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
SSC5DA1L4H1 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC24.26■■□□□ 1.47
SSC5DA1L4H1 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SSC5DA1L4H1 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC24.26■■□□□ 1.47
SSC5DA1L4H1 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC24.26■■□□□ 1.47
SSC5DA1L4H1 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC24.25■■□□□ 1.47
SSC5DA1L4H1 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SSC5DA1L4H1 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC24.25■■□□□ 1.47
SSC5DA1L4H1 AC120498.8-201ENST00000614275 531 ntBASIC24.25■■□□□ 1.47
SSC5DA1L4H1 AC133561.5-201ENST00000635547 218 ntBASIC24.25■■□□□ 1.47
SSC5DA1L4H1 AC097493.4-201ENST00000641197 219 ntBASIC24.25■■□□□ 1.47
SSC5DA1L4H1 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SSC5DA1L4H1 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
SSC5DA1L4H1 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC24.25■■□□□ 1.47
SSC5DA1L4H1 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SSC5DA1L4H1 PENK-204ENST00000518770 863 ntTSL 2 BASIC24.25■■□□□ 1.47
SSC5DA1L4H1 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC24.25■■□□□ 1.47
SSC5DA1L4H1 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC24.25■■□□□ 1.47
SSC5DA1L4H1 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SSC5DA1L4H1 AC006557.6-201ENST00000623071 864 ntBASIC24.25■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms