Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.57■□□□□ 0.88
CCDC163A0A0D9SF12 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.57■□□□□ 0.88
CCDC163A0A0D9SF12 AC087633.2-202ENST00000565166 1439 ntBASIC20.57■□□□□ 0.88
CCDC163A0A0D9SF12 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC163A0A0D9SF12 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CCDC163A0A0D9SF12 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC163A0A0D9SF12 AC113410.3-201ENST00000623366 203 ntBASIC20.57■□□□□ 0.88
CCDC163A0A0D9SF12 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC163A0A0D9SF12 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC163A0A0D9SF12 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC163A0A0D9SF12 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC163A0A0D9SF12 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC163A0A0D9SF12 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.56■□□□□ 0.88
CCDC163A0A0D9SF12 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC163A0A0D9SF12 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CCDC163A0A0D9SF12 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.56■□□□□ 0.88
CCDC163A0A0D9SF12 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC163A0A0D9SF12 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
CCDC163A0A0D9SF12 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.56■□□□□ 0.88
CCDC163A0A0D9SF12 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
CCDC163A0A0D9SF12 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.56■□□□□ 0.88
CCDC163A0A0D9SF12 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC163A0A0D9SF12 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.56■□□□□ 0.88
CCDC163A0A0D9SF12 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC163A0A0D9SF12 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.56■□□□□ 0.88
CCDC163A0A0D9SF12 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.56■□□□□ 0.88
CCDC163A0A0D9SF12 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.56■□□□□ 0.88
CCDC163A0A0D9SF12 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC163A0A0D9SF12 AC068473.5-201ENST00000616428 2072 ntBASIC20.56■□□□□ 0.88
CCDC163A0A0D9SF12 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
CCDC163A0A0D9SF12 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC163A0A0D9SF12 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC163A0A0D9SF12 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC163A0A0D9SF12 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC163A0A0D9SF12 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC163A0A0D9SF12 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC163A0A0D9SF12 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC163A0A0D9SF12 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC163A0A0D9SF12 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.55■□□□□ 0.88
CCDC163A0A0D9SF12 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC163A0A0D9SF12 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CCDC163A0A0D9SF12 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CCDC163A0A0D9SF12 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.55■□□□□ 0.88
CCDC163A0A0D9SF12 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC163A0A0D9SF12 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC163A0A0D9SF12 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CCDC163A0A0D9SF12 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
CCDC163A0A0D9SF12 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC163A0A0D9SF12 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC163A0A0D9SF12 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC163A0A0D9SF12 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC163A0A0D9SF12 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CCDC163A0A0D9SF12 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC163A0A0D9SF12 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC163A0A0D9SF12 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC163A0A0D9SF12 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC163A0A0D9SF12 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC163A0A0D9SF12 KRASP1-201ENST00000407852 552 ntBASIC20.53■□□□□ 0.88
CCDC163A0A0D9SF12 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.53■□□□□ 0.88
CCDC163A0A0D9SF12 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC163A0A0D9SF12 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
CCDC163A0A0D9SF12 PRKY-204ENST00000533551 1019 ntBASIC20.53■□□□□ 0.88
CCDC163A0A0D9SF12 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.53■□□□□ 0.88
CCDC163A0A0D9SF12 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC163A0A0D9SF12 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CCDC163A0A0D9SF12 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
CCDC163A0A0D9SF12 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CCDC163A0A0D9SF12 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC163A0A0D9SF12 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC163A0A0D9SF12 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC163A0A0D9SF12 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC163A0A0D9SF12 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC163A0A0D9SF12 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC163A0A0D9SF12 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
CCDC163A0A0D9SF12 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.52■□□□□ 0.88
CCDC163A0A0D9SF12 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC163A0A0D9SF12 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC163A0A0D9SF12 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.52■□□□□ 0.88
CCDC163A0A0D9SF12 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC163A0A0D9SF12 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CCDC163A0A0D9SF12 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC163A0A0D9SF12 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC163A0A0D9SF12 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC163A0A0D9SF12 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC163A0A0D9SF12 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.52■□□□□ 0.88
CCDC163A0A0D9SF12 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.52■□□□□ 0.88
CCDC163A0A0D9SF12 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.52■□□□□ 0.88
CCDC163A0A0D9SF12 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.52■□□□□ 0.88
CCDC163A0A0D9SF12 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.52■□□□□ 0.88
CCDC163A0A0D9SF12 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC163A0A0D9SF12 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CCDC163A0A0D9SF12 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC163A0A0D9SF12 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CCDC163A0A0D9SF12 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CCDC163A0A0D9SF12 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.52■□□□□ 0.87
CCDC163A0A0D9SF12 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC163A0A0D9SF12 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC163A0A0D9SF12 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC163A0A0D9SF12 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC163A0A0D9SF12 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms