Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 AL162412.1-201ENST00000567129 965 ntBASIC16.25■□□□□ 0.19
TRAV41A0A0B4J266 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV41A0A0B4J266 AC005181.1-201ENST00000604782 1256 ntBASIC16.25■□□□□ 0.19
TRAV41A0A0B4J266 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV41A0A0B4J266 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV41A0A0B4J266 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAV41A0A0B4J266 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV41A0A0B4J266 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV41A0A0B4J266 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV41A0A0B4J266 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV41A0A0B4J266 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC16.24■□□□□ 0.19
TRAV41A0A0B4J266 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV41A0A0B4J266 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TRAV41A0A0B4J266 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV41A0A0B4J266 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV41A0A0B4J266 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAV41A0A0B4J266 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC16.24■□□□□ 0.19
TRAV41A0A0B4J266 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV41A0A0B4J266 AC008694.1-202ENST00000636953 945 ntBASIC16.24■□□□□ 0.19
TRAV41A0A0B4J266 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
TRAV41A0A0B4J266 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV41A0A0B4J266 AC068338.2-201ENST00000563278 1430 ntBASIC16.24■□□□□ 0.19
TRAV41A0A0B4J266 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV41A0A0B4J266 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAV41A0A0B4J266 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV41A0A0B4J266 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV41A0A0B4J266 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV41A0A0B4J266 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAV41A0A0B4J266 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV41A0A0B4J266 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAV41A0A0B4J266 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV41A0A0B4J266 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV41A0A0B4J266 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV41A0A0B4J266 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV41A0A0B4J266 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAV41A0A0B4J266 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV41A0A0B4J266 MIR663A-201ENST00000385250 93 ntBASIC16.23■□□□□ 0.19
TRAV41A0A0B4J266 AC006970.2-201ENST00000450065 779 ntBASIC16.23■□□□□ 0.19
TRAV41A0A0B4J266 CASP6-205ENST00000505486 538 ntTSL 4 BASIC16.23■□□□□ 0.19
TRAV41A0A0B4J266 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAV41A0A0B4J266 AC069236.1-201ENST00000604339 616 ntBASIC16.23■□□□□ 0.19
TRAV41A0A0B4J266 RAP2CP1-201ENST00000605103 478 ntBASIC16.23■□□□□ 0.19
TRAV41A0A0B4J266 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV41A0A0B4J266 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV41A0A0B4J266 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TRAV41A0A0B4J266 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV41A0A0B4J266 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV41A0A0B4J266 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV41A0A0B4J266 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAV41A0A0B4J266 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV41A0A0B4J266 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAV41A0A0B4J266 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV41A0A0B4J266 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV41A0A0B4J266 AC005229.4-201ENST00000610085 2198 ntBASIC16.23■□□□□ 0.19
TRAV41A0A0B4J266 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV41A0A0B4J266 AC121338.2-201ENST00000622535 1744 ntBASIC16.22■□□□□ 0.19
TRAV41A0A0B4J266 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV41A0A0B4J266 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
TRAV41A0A0B4J266 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV41A0A0B4J266 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV41A0A0B4J266 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV41A0A0B4J266 CYP2T1P-201ENST00000432607 1285 ntBASIC16.22■□□□□ 0.19
TRAV41A0A0B4J266 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV41A0A0B4J266 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC16.22■□□□□ 0.19
TRAV41A0A0B4J266 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.22■□□□□ 0.19
TRAV41A0A0B4J266 FAM21FP-204ENST00000608637 956 ntBASIC16.22■□□□□ 0.19
TRAV41A0A0B4J266 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV41A0A0B4J266 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV41A0A0B4J266 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV41A0A0B4J266 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TRAV41A0A0B4J266 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
TRAV41A0A0B4J266 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
TRAV41A0A0B4J266 AC011484.1-201ENST00000377652 1995 ntBASIC16.22■□□□□ 0.19
TRAV41A0A0B4J266 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC16.22■□□□□ 0.19
TRAV41A0A0B4J266 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC16.22■□□□□ 0.19
TRAV41A0A0B4J266 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TRAV41A0A0B4J266 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV41A0A0B4J266 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV41A0A0B4J266 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAV41A0A0B4J266 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
TRAV41A0A0B4J266 SAPCD2P1-201ENST00000395413 1184 ntBASIC16.21■□□□□ 0.19
TRAV41A0A0B4J266 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAV41A0A0B4J266 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
TRAV41A0A0B4J266 APTR-203ENST00000430801 583 ntTSL 5 BASIC16.21■□□□□ 0.19
TRAV41A0A0B4J266 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16.21■□□□□ 0.19
TRAV41A0A0B4J266 AC090192.1-201ENST00000517740 490 ntBASIC16.21■□□□□ 0.19
TRAV41A0A0B4J266 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV41A0A0B4J266 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
TRAV41A0A0B4J266 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV41A0A0B4J266 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRAV41A0A0B4J266 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRAV41A0A0B4J266 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
TRAV41A0A0B4J266 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.18
TRAV41A0A0B4J266 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRAV41A0A0B4J266 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC16.21■□□□□ 0.18
TRAV41A0A0B4J266 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV41A0A0B4J266 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV41A0A0B4J266 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC16.2■□□□□ 0.18
TRAV41A0A0B4J266 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV41A0A0B4J266 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms