Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 POLR1B-203ENST00000409894 4457 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
SNX18Q96RF0 ACAD10-220ENST00000549590 2888 ntTSL 5 BASIC8.73□□□□□ -1.01
SNX18Q96RF0 RSBN1L-203ENST00000445288 2667 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
SNX18Q96RF0 SPTAN1-202ENST00000372731 7889 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
SNX18Q96RF0 RABGAP1-202ENST00000373647 4997 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
SNX18Q96RF0 NOL11-201ENST00000253247 2947 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
SNX18Q96RF0 CRYZL1-201ENST00000290244 1685 ntTSL 5 BASIC8.73□□□□□ -1.01
SNX18Q96RF0 SLC7A2-202ENST00000398090 7557 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
SNX18Q96RF0 BZW2-212ENST00000452975 1464 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
SNX18Q96RF0 COPB1-202ENST00000439561 3382 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
SNX18Q96RF0 POU6F2-207ENST00000518318 5925 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
SNX18Q96RF0 PTMA-201ENST00000341369 1212 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
SNX18Q96RF0 CLEC4C-202ENST00000360345 970 ntAPPRIS P4 TSL 1 (best) BASIC8.73□□□□□ -1.01
SNX18Q96RF0 ST3GAL3-215ENST00000372367 644 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
SNX18Q96RF0 HIST1H4H-201ENST00000377727 397 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
SNX18Q96RF0 MAPRE3-202ENST00000402218 1001 ntTSL 5 BASIC8.73□□□□□ -1.01
SNX18Q96RF0 AL627402.1-201ENST00000405276 735 ntBASIC8.73□□□□□ -1.01
SNX18Q96RF0 AL590559.1-201ENST00000414338 374 ntBASIC8.73□□□□□ -1.01
SNX18Q96RF0 AL445070.1-201ENST00000414631 714 ntTSL 3 BASIC8.73□□□□□ -1.01
SNX18Q96RF0 AC073987.1-201ENST00000422683 638 ntTSL 3 BASIC8.73□□□□□ -1.01
SNX18Q96RF0 AC130710.1-202ENST00000428280 853 ntTSL 3 BASIC8.73□□□□□ -1.01
SNX18Q96RF0 IQCF4-204ENST00000433169 414 ntTSL 3 BASIC8.73□□□□□ -1.01
SNX18Q96RF0 AC114808.1-201ENST00000437132 432 ntTSL 2 BASIC8.73□□□□□ -1.01
SNX18Q96RF0 SNX25P1-201ENST00000441817 834 ntBASIC8.73□□□□□ -1.01
SNX18Q96RF0 MEG8-205ENST00000442197 625 ntTSL 2 BASIC8.73□□□□□ -1.01
SNX18Q96RF0 RNU7-92P-201ENST00000458830 76 ntBASIC8.73□□□□□ -1.01
SNX18Q96RF0 RNU7-173P-201ENST00000458903 76 ntBASIC8.73□□□□□ -1.01
SNX18Q96RF0 RN7SL417P-201ENST00000459938 265 ntBASIC8.73□□□□□ -1.01
SNX18Q96RF0 RN7SL116P-201ENST00000470786 305 ntBASIC8.73□□□□□ -1.01
SNX18Q96RF0 DUBR-203ENST00000473550 738 ntTSL 3 BASIC8.73□□□□□ -1.01
SNX18Q96RF0 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC8.73□□□□□ -1.01
SNX18Q96RF0 AC091917.3-201ENST00000509496 600 ntBASIC8.73□□□□□ -1.01
SNX18Q96RF0 ST3GAL3-229ENST00000528371 599 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
SNX18Q96RF0 RRP8-205ENST00000534343 726 ntTSL 2 BASIC8.73□□□□□ -1.01
SNX18Q96RF0 IFITM9P-201ENST00000535743 396 ntBASIC8.73□□□□□ -1.01
SNX18Q96RF0 CLEC4C-204ENST00000540085 860 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
SNX18Q96RF0 AC140847.3-201ENST00000542491 708 ntBASIC8.73□□□□□ -1.01
SNX18Q96RF0 AP002840.1-201ENST00000546284 524 ntTSL 3 BASIC8.73□□□□□ -1.01
SNX18Q96RF0 Metazoa_SRP.12-201ENST00000553249 268 ntBASIC8.73□□□□□ -1.01
SNX18Q96RF0 OR4K16P-201ENST00000554603 969 ntBASIC8.73□□□□□ -1.01
SNX18Q96RF0 C14orf2-210ENST00000555030 749 ntTSL 3 BASIC8.73□□□□□ -1.01
SNX18Q96RF0 HNRNPA3P16-201ENST00000591842 1016 ntBASIC8.73□□□□□ -1.01
SNX18Q96RF0 AL627309.8-201ENST00000595919 284 ntBASIC8.73□□□□□ -1.01
SNX18Q96RF0 AC091982.3-201ENST00000603996 1115 ntBASIC8.73□□□□□ -1.01
SNX18Q96RF0 AL121890.4-201ENST00000616569 609 ntTSL 3 BASIC8.73□□□□□ -1.01
SNX18Q96RF0 AC236972.3-202ENST00000620734 1222 ntTSL 3 BASIC8.73□□□□□ -1.01
SNX18Q96RF0 AC007603.2-201ENST00000623281 506 ntBASIC8.73□□□□□ -1.01
SNX18Q96RF0 COPS4-202ENST00000503682 1702 ntTSL 5 BASIC8.73□□□□□ -1.01
SNX18Q96RF0 ATP8B5P-202ENST00000423138 2157 ntBASIC8.73□□□□□ -1.01
SNX18Q96RF0 R3HDM2P1-201ENST00000505381 1960 ntBASIC8.73□□□□□ -1.01
SNX18Q96RF0 BCO2-208ENST00000526088 1983 ntTSL 2 BASIC8.73□□□□□ -1.01
SNX18Q96RF0 FLJ22447-202ENST00000556569 1312 ntTSL 2 BASIC8.73□□□□□ -1.01
SNX18Q96RF0 GABPA-201ENST00000354828 5120 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
SNX18Q96RF0 STK36-201ENST00000295709 4933 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
SNX18Q96RF0 EPHB2-203ENST00000374632 3677 ntAPPRIS P4 TSL 1 (best) BASIC8.73□□□□□ -1.01
SNX18Q96RF0 UTS2-203ENST00000377516 1601 ntTSL 5 BASIC8.72□□□□□ -1.01
SNX18Q96RF0 OLMALINC-201ENST00000454935 2551 ntTSL 2 BASIC8.72□□□□□ -1.01
SNX18Q96RF0 MAPK10-228ENST00000512689 2583 ntTSL 5 BASIC8.72□□□□□ -1.01
SNX18Q96RF0 NRP1-207ENST00000374875 5407 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
SNX18Q96RF0 HMSD-201ENST00000408945 2101 ntAPPRIS P1 TSL 3 BASIC8.72□□□□□ -1.01
SNX18Q96RF0 LRRC49-203ENST00000443425 3085 ntTSL 2 BASIC8.72□□□□□ -1.01
SNX18Q96RF0 CYP24A1-202ENST00000395954 1438 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
SNX18Q96RF0 BCAS1-202ENST00000395961 3303 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SNX18Q96RF0 ZNF195-230ENST00000620374 3342 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
SNX18Q96RF0 CARD8-216ENST00000520153 2617 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
SNX18Q96RF0 SERPINB11-201ENST00000382749 1918 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SNX18Q96RF0 MRNIP-204ENST00000518219 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
SNX18Q96RF0 KIF5A-202ENST00000455537 5824 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SNX18Q96RF0 RNF185-202ENST00000326132 3171 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SNX18Q96RF0 NCKAP5-201ENST00000317721 7593 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
SNX18Q96RF0 NCKAP5-205ENST00000409261 7594 ntAPPRIS P4 TSL 5 BASIC8.72□□□□□ -1.01
SNX18Q96RF0 VSIG4-202ENST00000412866 1474 ntTSL 2 BASIC8.72□□□□□ -1.01
SNX18Q96RF0 LINC01847-203ENST00000641163 1490 ntBASIC8.72□□□□□ -1.01
SNX18Q96RF0 SVEP1-203ENST00000401783 12350 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
SNX18Q96RF0 BTBD3-215ENST00000618918 4486 ntAPPRIS ALT1 TSL 4 BASIC8.72□□□□□ -1.01
SNX18Q96RF0 ZNF557-202ENST00000414706 5736 ntAPPRIS ALT2 TSL 2 BASIC8.72□□□□□ -1.01
SNX18Q96RF0 CELF2-209ENST00000631460 5538 ntTSL 5 BASIC8.72□□□□□ -1.01
SNX18Q96RF0 FLJ31356-202ENST00000445878 3001 ntTSL 4 BASIC8.72□□□□□ -1.01
SNX18Q96RF0 LSM5-208ENST00000450169 2258 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SNX18Q96RF0 AC079193.2-201ENST00000513892 2292 ntTSL 2 BASIC8.72□□□□□ -1.01
SNX18Q96RF0 KLF8-204ENST00000468660 1543 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SNX18Q96RF0 SAA2-201ENST00000256733 563 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SNX18Q96RF0 RIPPLY1-201ENST00000276173 1172 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
SNX18Q96RF0 SNRPD2-201ENST00000342669 901 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SNX18Q96RF0 SH2D1A-201ENST00000360027 593 ntAPPRIS ALT1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SNX18Q96RF0 CT83-201ENST00000371894 548 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SNX18Q96RF0 C20orf173-202ENST00000374345 985 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
SNX18Q96RF0 AP000529.1-201ENST00000417657 1123 ntBASIC8.72□□□□□ -1.01
SNX18Q96RF0 AC017053.1-201ENST00000425125 579 ntTSL 4 BASIC8.72□□□□□ -1.01
SNX18Q96RF0 AC114737.1-201ENST00000434531 453 ntTSL 5 BASIC8.72□□□□□ -1.01
SNX18Q96RF0 TGFA-IT1-201ENST00000441238 436 ntTSL 5 BASIC8.72□□□□□ -1.01
SNX18Q96RF0 AC073321.1-201ENST00000441803 654 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
SNX18Q96RF0 AL590396.1-201ENST00000450208 775 ntBASIC8.72□□□□□ -1.01
SNX18Q96RF0 LINC00370-201ENST00000455487 698 ntTSL 3 BASIC8.72□□□□□ -1.01
SNX18Q96RF0 AC092159.1-202ENST00000456255 389 ntTSL 3 BASIC8.72□□□□□ -1.01
SNX18Q96RF0 RPL36P4-201ENST00000456725 318 ntBASIC8.72□□□□□ -1.01
SNX18Q96RF0 AC005522.2-201ENST00000479299 453 ntTSL 3 BASIC8.72□□□□□ -1.01
SNX18Q96RF0 ACOT9-207ENST00000492081 683 ntTSL 3 BASIC8.72□□□□□ -1.01
SNX18Q96RF0 SSR2-213ENST00000496742 825 ntTSL 3 BASIC8.72□□□□□ -1.01
SNX18Q96RF0 AC026444.1-201ENST00000502592 496 ntBASIC8.72□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms